Evidence map›Paper›PMID 39227607›Full record

ArticleScientific data2024

Deepdive: Leveraging Pre-trained Deep Learning for Deep-Sea ROV Biota Identification in the Great Barrier Reef.

Ratneel Deo, Cédric M John, Chen Zhang, Kate Whitton, Tristan Salles, Jody M Webster, Rohitash Chandra

Abstract readDataset
In one paragraph

Article in Scientific data, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Ratneel DeoGeocoastal Research Group, School of Geosciences, University of Sydney, New South Wales, Australia. deo.ratneel@gmail.com.ORCID 0000-0003-3801-8612
Cédric M JohnDigital Environment Research Institute (DERI), Queen Mary University of London, Empire House, London, E1 1HH, United Kingdom.
Chen ZhangGeocoastal Research Group, School of Geosciences, University of Sydney, New South Wales, Australia.
Kate WhittonGeocoastal Research Group, School of Geosciences, University of Sydney, New South Wales, Australia.
Tristan SallesGeocoastal Research Group, School of Geosciences, University of Sydney, New South Wales, Australia.
Jody M WebsterGeocoastal Research Group, School of Geosciences, University of Sydney, New South Wales, Australia.ORCID 0000-0002-0005-6448
Rohitash ChandraITTC ARC Centre for Data Analytics for Resources and Environment, Biomedical Building, University of Sydney, New South Wales, Australia.ORCID 0000-0001-6353-1464

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Understanding and preserving the deep sea ecosystems is paramount for marine conservation efforts. Automated object (deep-sea biota) classification can enable the creation of detailed habitat maps that not only aid in biodiversity assessments but also provide essential data to evaluate ecosystem health and resilience. Having a significant source of labelled data helps prevent overfitting and enables training deep learning models with numerous parameters. In this paper, we contribute to the establishment of a significant deep-sea remotely operated vehicle (ROV) image classification dataset with 3994 images featuring deep-sea biota belonging to 33 classes. We manually label the images through rigorous quality control with human-in-the-loop image labelling. Leveraging data from ROV equipped with advanced imaging systems, our study provides results using novel deep-learning models for image classification. We use deep learning models including ResNet, DenseNet, Inception, and Inception-ResNet to benchmark the dataset that features class imbalance with many classes. Our results show that the Inception-ResNet model provides a mean classification accuracy of 65%, with AUC scores exceeding 0.8 for each class.

Indexed as

Coral ReefsDeep LearningBiodiversityBiotaConservation of Natural ResourcesEcosystem

Identifiers

PMID39227607
PMCPMC11372175

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.