Evidence map›Paper›PMID 39226902›Full record

ArticleMolecular cell2024

Stabilization of the hexasome intermediate during histone exchange by yeast SWR1 complex.

Adam S B Jalal, Paul Girvan, Eugene Y D Chua, Lexin Liu, Shijie Wang, Elizabeth A McCormack, Michael T Skehan, Carol L Knight, David S Rueda, Dale B Wigley

Abstract read
In one paragraph

Article in Molecular cell, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Article
  2. Cryo-EM structure of ALC1 in an open conformation bound to a PARylated nucleosome.Acta crystallographica. Section D, Structural biology · 2026
    Article
  3. Article
  4. Article
  5. Article
  6. Mechanistic insights into INO80-type chromatin remodelers.Current opinion in structural biology · 2025
    Review
  7. Article
  8. RNA Polymerase II coordinates histone deacetylation at active promoters.bioRxiv : the preprint server for biology · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Adam S B JalalSection of Structural Biology, Department Infectious Disease, Faculty of Medicine, Imperial College London, London SW7 2AZ, UK.
Paul GirvanSection of Structural Biology, Department Infectious Disease, Faculty of Medicine, Imperial College London, London SW7 2AZ, UK; Single Molecule Imaging Group, MRC Laboratory of Medical Sciences, Du Cane Road, London W12 0HS, UK.
Eugene Y D ChuaSection of Structural Biology, Department Infectious Disease, Faculty of Medicine, Imperial College London, London SW7 2AZ, UK.
Lexin LiuSection of Structural Biology, Department Infectious Disease, Faculty of Medicine, Imperial College London, London SW7 2AZ, UK.
Shijie WangSection of Structural Biology, Department Infectious Disease, Faculty of Medicine, Imperial College London, London SW7 2AZ, UK.
Elizabeth A McCormackSection of Structural Biology, Department Infectious Disease, Faculty of Medicine, Imperial College London, London SW7 2AZ, UK.
Michael T SkehanSection of Structural Biology, Department Infectious Disease, Faculty of Medicine, Imperial College London, London SW7 2AZ, UK.
Carol L KnightSection of Structural Biology, Department Infectious Disease, Faculty of Medicine, Imperial College London, London SW7 2AZ, UK.
David S RuedaSingle Molecule Imaging Group, MRC Laboratory of Medical Sciences, Du Cane Road, London W12 0HS, UK; Section of Virology, Department Infectious Disease, Faculty of Medicine, Imperial College London, Du Cane Road, London W12 0HS, UK.
Dale B WigleySection of Structural Biology, Department Infectious Disease, Faculty of Medicine, Imperial College London, London SW7 2AZ, UK. Electronic address: d.wigley@imperial.ac.uk.

Funding

Cancer Research UK C6913/A21608Medical Research Council MR/N009258/1Medical Research Council MR/R009023/1Wellcome Trust 209327/Z/17/Z
6 · The paper itself

Abstract

The yeast SWR1 complex catalyzes the exchange of histone H2A/H2B dimers in nucleosomes with Htz1/H2B dimers. We use cryoelectron microscopy to determine the structure of an enzyme-bound hexasome intermediate in the reaction pathway of histone exchange, in which an H2A/H2B dimer has been extracted from a nucleosome prior to the insertion of a dimer comprising Htz1/H2B. The structure reveals a key role for the Swc5 subunit in stabilizing the unwrapping of DNA from the histone core of the hexasome. By engineering a crosslink between an Htz1/H2B dimer and its chaperone protein Chz1, we show that this blocks histone exchange by SWR1 but allows the incoming chaperone-dimer complex to insert into the hexasome. We use this reagent to trap an SWR1/hexasome complex with an incoming Htz1/H2B dimer that shows how the reaction progresses to the next step. Taken together the structures reveal insights into the mechanism of histone exchange by SWR1 complex.

Indexed as

Cryoelectron MicroscopyHistonesNucleosomesProtein MultimerizationSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsAdenosine TriphosphatasesChromosomal Proteins, Non-HistoneHistone ChaperonesModels, MolecularProtein BindingAdenosine TriphosphatasesChromosomal Proteins, Non-HistoneChz1 protein, S cerevisiaeHistone ChaperonesHistonesHtz1 protein, S cerevisiaeNucleosomesSaccharomyces cerevisiae ProteinsSwr1 protein, S cerevisiaechromatin remodelinghistone exchangeSWR1 complex

Identifiers

PMID39226902
PMCPMC7619409

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.