Evidence map›Paper›PMID 39225484›Full record

ArticleAntimicrobial agents and chemotherapy2024

Design of novel and highly selective SARS-CoV-2 main protease inhibitors.

Adi N R Poli, Ian Tietjen, Nitesh K Nandwana, Joel Cassel, Troy E Messick, Emery T Register, Frederick Keeney, Rajesh Rajaiah, Atul K Verma, Kabita Pandey and 4 more

Abstract read
In one paragraph

Article in Antimicrobial agents and chemotherapy, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Adi N R PoliMedicinal Chemistry, The Wistar Institute, Philadelphia, Pennsylvania, USA.
Ian TietjenHIV-1 Program in the Vaccine and Immunotherapy Center, The Wistar Institute, Philadelphia, Pennsylvania, USA.ORCID 0000-0002-8991-6490
Nitesh K NandwanaMedicinal Chemistry, The Wistar Institute, Philadelphia, Pennsylvania, USA.
Joel CasselThe Wistar Cancer Center Molecular Screening, The Wistar Institute, Philadelphia, Pennsylvania, USA.
Troy E MessickThe Wistar Institute, Philadelphia, Pennsylvania, USA.
Emery T RegisterHIV-1 Program in the Vaccine and Immunotherapy Center, The Wistar Institute, Philadelphia, Pennsylvania, USA.
Frederick KeeneyHIV-1 Program in the Vaccine and Immunotherapy Center, The Wistar Institute, Philadelphia, Pennsylvania, USA.
Rajesh RajaiahDepartment of Pharmacology & Experimental Neuroscience, University of Nebraska Medical Center, Omaha, Nebraska, USA.
Atul K VermaDepartment of Pharmacology & Experimental Neuroscience, University of Nebraska Medical Center, Omaha, Nebraska, USA.
Kabita PandeyDepartment of Pharmacology & Experimental Neuroscience, University of Nebraska Medical Center, Omaha, Nebraska, USA.
Arpan AcharyaDepartment of Pharmacology & Experimental Neuroscience, University of Nebraska Medical Center, Omaha, Nebraska, USA.
Siddappa N ByrareddyDepartment of Pharmacology & Experimental Neuroscience, University of Nebraska Medical Center, Omaha, Nebraska, USA.
Luis J MontanerHIV-1 Program in the Vaccine and Immunotherapy Center, The Wistar Institute, Philadelphia, Pennsylvania, USA.
Joseph M SalvinoMedicinal Chemistry, The Wistar Institute, Philadelphia, Pennsylvania, USA.ORCID 0000-0002-2184-5980

Funding

Tumor Microenvironment and MetastasisP30CA010815 · NCI · WISTAR INSTITUTE · PI Aaron Robert Goldman · 1985 to 2026
$75.9M
Purchase of an Echo 650 acoustic liquid handler with Access workstationS10OD030245 · OD · WISTAR INSTITUTE · PI SALVINO, JOSEPH M · 2021 to 2021
$567k
Canadian Government | Canadian Institutes of Health Research (CIHR) CIHR PJT-153057HHS | National Institutes of Health (NIH) S10OD030245,P30 CA010815NCI NIH HHS P30 CA010815NIH HHS S10 OD030245
6 · The paper itself

Abstract

We have synthesized a novel and highly selective severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) main protease peptide mimetic inhibitor mimicking the replicase 1ab recognition sequence -Val-Leu-Gln- and utilizing a cysteine selective acyloxymethyl ketone as the electrophilic warhead to target the active site Cys145. Utilizing a constrained cyclic peptide that locks the conformation between the P3 (Val) and P2 (Leu) residues, we identified a highly selective inhibitor that fills the P2 pocket occupied by the leucine residue sidechain of PF-00835231 and the dimethyl-3-azabicyclo-hexane motif in nirmatrelvir (PF-07321332). This strategy resulted in potent and highly selective Mpro inhibitors without inhibiting essential host cathepsin cysteine or serine proteases. The lead prototype compound 1 (MPro IC

Indexed as

Adenosine MonophosphateAntiviral AgentsCoronavirus 3C ProteasesProtease InhibitorsSARS-CoV-2Virus ReplicationAlanineAnimalsCatalytic DomainChlorocebus aethiopsCOVID-19COVID-19 Drug TreatmentCricetinaeDrug DesignHumansLactamsAdenosine MonophosphateAlanineAntiviral AgentsCoronavirus 3C ProteasesLactamsLeucinenirmatrelvirNitrilesPeptides, CyclicProlineProtease InhibitorsremdesivirViral Nonstructural Proteinsbenzoxazepinepeptide mimeticprotease inhibitorSARS-CoV-2

Identifiers

PMID39225484
PMCPMC11459967

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.