Evidence map›Paper›PMID 39224833›Full record

ArticleProceedings of the conference. Association for Computational Linguistics. North American Chapter. Meeting2024

ODD: A Benchmark Dataset for the Natural Language Processing Based Opioid Related Aberrant Behavior Detection.

Sunjae Kwon, Xun Wang, Weisong Liu, Emily Druhl, Minhee L Sung, Joel I Reisman, Wenjun Li, Robert D Kerns, William Becker, Hong Yu

Abstract read
In one paragraph

Article in Proceedings of the conference. Association for Computational Linguistics. North American Chapter. Meeting, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Review
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Sunjae KwonUMass Amherst.
Xun WangMicrosoft.
Weisong LiuUMass Lowell.
Emily DruhlU.S. Department of Veterans Affairs.
Minhee L SungYale University.
Joel I ReismanU.S. Department of Veterans Affairs.
Wenjun LiUMass Lowell.
Robert D KernsYale University.
William BeckerYale University.
Hong YuUMass Amherst.

Funding

Yale Clinical and Translational Science Award (U Component)UL1TR001863 · NCATS · YALE UNIVERSITY · PI John H. Krystal, LUCILA OHNO-MACHADO · 2016 to 2026
$102.9M
Identifying Opioid Overdose Predictors using EHRsR01DA045816 · NIDA · UNIVERSITY OF MASSACHUSETTS LOWELL · PI BECKER, WILLIAM C, LI, WENJUN · 2018 to 2022
$3.0M
Social and behavioral determinants of MOUD utilization and opioid overdoseR01DA056470 · NIDA · UNIVERSITY OF MASSACHUSETTS LOWELL · PI Wenjun Li, DAVID A SMELSON · 2023 to 2026
$2.9M
Surveillance of Modifiable Social Determinants of Health for Prioritizing Wraparound SupportsI01HX003711 · VA · EDITH NOURSE ROGERS MEMORIAL VETERANS HOSPITAL · PI Terri K. Pogoda, HONG YU · 2024 to 2026
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HSRD VA I01 HX000281HSRD VA I01 HX003711NCATS NIH HHS UL1 TR001863NIDA NIH HHS R01 DA045816NIDA NIH HHS R01 DA056470
6 · The paper itself

Abstract

Opioid related aberrant behaviors (ORABs) present novel risk factors for opioid overdose. This paper introduces a novel biomedical natural language processing benchmark dataset named ODD, for ORAB Detection Dataset. ODD is an expert-annotated dataset designed to identify ORABs from patients' EHR notes and classify them into nine categories; 1) Confirmed Aberrant Behavior, 2) Suggested Aberrant Behavior, 3) Opioids, 4) Indication, 5) Diagnosed opioid dependency, 6) Benzodiazepines, 7) Medication Changes, 8) Central Nervous System-related, and 9) Social Determinants of Health. We explored two state-of-the-art natural language processing models (fine-tuning and prompt-tuning approaches) to identify ORAB. Experimental results show that the prompt-tuning models outperformed the fine-tuning models in most categories and the gains were especially higher among uncommon categories (Suggested Aberrant Behavior, Confirmed Aberrant Behaviors, Diagnosed Opioid Dependence, and Medication Change). Although the best model achieved the highest 88.17% on macro average area under precision recall curve, uncommon classes still have a large room for performance improvement. ODD is publicly available.

Identifiers

PMID39224833
PMCPMC11368170

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.