Evidence map›Paper›PMID 39224264›Full record

ArticleHeliyon2024

Genome-level therapeutic targets identification and chimeric Vaccine designing against the

Sawvara Mursaleen, Asifa Sarfraz, Muhammad Shehroz, Aqal Zaman, Faiz U Rahman, Arlindo A Moura, Sheheryar Sheheryar, Shahid Aziz, Riaz Ullah, Zafar Iqbal and 3 more

Abstract read
In one paragraph

Article in Heliyon, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Sawvara MursaleenDepartment of Biochemistry, Bahauddin Zakariya University, Multan-66000, Pakistan.
Asifa SarfrazDepartment of Biochemistry, Bahauddin Zakariya University, Multan-66000, Pakistan.
Muhammad ShehrozDepartment of Bioinformatics, Kohsar University Murree, Murree-47150, Pakistan.
Aqal ZamanDepartment of Microbiology & Molecular Genetics, Bahauddin Zakariya University, Multan-66000, Pakistan.
Faiz U RahmanDepartment of Zoology, Shangla Campus, University of Swat, Khyber Pakhtunkhwa, Pakistan.
Arlindo A MouraDepartment of Animal Science, Federal University of Ceara, Fortaleza, Brazil.
Sheheryar SheheryarDepartment of Animal Science, Federal University of Ceara, Fortaleza, Brazil.
Shahid AzizFunctional Genomics and Bioinformatics Group, Department of Biochemistry and Molecular Biology, Federal University of Ceará, Fortaleza 60451-970, Brazil.
Riaz UllahDepartment of Pharmacognosy, College of Pharmacy, King Saud University Riyadh Saudi Arabia, Kingdom of Saudi Arabia.
Zafar IqbalDepartment of Surgery, College of Medicine, King Saud University P.O. Box 7805, Riyadh, 11472, Kingdom of Saudi Arabia.
Umar NishanDepartment of Chemistry, Kohat University of Science & Technology, Kohat, Pakistan.
Mohibullah ShahDepartment of Biochemistry, Bahauddin Zakariya University, Multan-66000, Pakistan.
Wenwen SunDepartment of Intensive Care Unit, Changzhou Maternity and Child Health Care Hospital, Changzhou Medical Center, Nanjing Medical University, 213004, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Blastomyces dermatitidis is a thermally dimorphic fungus that can cause serious and sometimes fatal infections, including blastomycosis. After spore inhalation, a pulmonary infection develops, which can be asymptomatic and have lethal effects, such as acute respiratory distress syndrome. Its most common extra-pulmonary sites are the central nervous system, bones, skin, and genito-urinary systems. Currently, no vaccine has been approved by the FDA to prevent this infection. In the study, a peptide-based vaccine was developed against blastomycosis by using subtractive proteomics and reverse vaccinology approaches. It focuses on mining the whole genome of B. dermatitidis, identifying potential therapeutic targets, and pinpointing potential epitopes for both B- and T-cells that are immunogenic, non-allergenic, non-toxic, and highly antigenic. Multi-epitope constructs were generated by incorporating appropriate linker sequences. A linker (EAAAK) was also added to incorporate an adjuvant sequence to increase immunological potential. The addition of adjuvants and linkers ultimately resulted in the formation of a vaccine construct in which the number of amino acids was 243 and the molecular weight was 26.18 kDa. The designed antigenic and non-allergenic vaccine constructs showed suitable physicochemical properties. The vaccine's structures were predicted, and further analysis verified their interactions with the human TLR-4 receptor through protein-protein docking. Additionally, MD simulation showed a potent interaction between prioritized vaccine-receptor complexes. Immune simulation predicted that the final vaccine injections resulted in significant immune responses for the T- and B-cell immune responses. Moreover, in silico cloning ensured a high expression possibility of the lead vaccine in the E. coli (K12) vector. This study offers an initiative for the development of effective vaccines against B. dermatitidis; however, it is necessary to validate the designed vaccine's immunogenicity experimentally.

Indexed as

Fungal infectionLungsPneumoniaReverse vaccinologySubtractive proteomics

Identifiers

PMID39224264
PMCPMC11367477

What OpenQuestion holds

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LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.