Evidence map›Paper›PMID 39223643›Full record

ArticleEuropean journal of medical research2024

Targeted gene sequencing and transcriptome sequencing reveal characteristics of NUP98 rearrangement in pediatric acute myeloid leukemia.

Jing-Ying Zhang, Chun-Rong Chen, Jia-Yue Qin, Di-Ying Shen, Li-Xia Liu, Hua Song, Tian Xia, Wei-Qun Xu, Yan Wang, Feng Zhu and 7 more

Abstract read
In one paragraph

Article in European journal of medical research, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

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0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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2 · The registry

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3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Review
  2. Article
  3. Using genomics to refine pediatric AML risk stratification.Hematology. American Society of Hematology. Education Program · 2025
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors.

Jing-Ying Zhang *Division/Center of Hematology-Oncology, Children's Hospital, Zhejiang University School of Medicine, Hangzhou, 310005, China.
Chun-Rong Chen *Division/Center of Hematology-Oncology, Children's Hospital, Zhejiang University School of Medicine, Hangzhou, 310005, China.
Jia-Yue Qin *Department of Medical Affairs, Acornmed Biotechnology Co., Ltd., Beijing, 100176, China.
Di-Ying ShenDivision/Center of Hematology-Oncology, Children's Hospital, Zhejiang University School of Medicine, Hangzhou, 310005, China.
Li-Xia LiuDepartment of Medical Affairs, Acornmed Biotechnology Co., Ltd., Beijing, 100176, China.
Hua SongDivision/Center of Hematology-Oncology, Children's Hospital, Zhejiang University School of Medicine, Hangzhou, 310005, China.
Tian XiaDivision/Center of Hematology-Oncology, Children's Hospital, Zhejiang University School of Medicine, Hangzhou, 310005, China.
Wei-Qun XuDivision/Center of Hematology-Oncology, Children's Hospital, Zhejiang University School of Medicine, Hangzhou, 310005, China.
Yan WangDivision/Center of Hematology-Oncology, Children's Hospital, Zhejiang University School of Medicine, Hangzhou, 310005, China.
Feng ZhuDivision/Center of Hematology-Oncology, Children's Hospital, Zhejiang University School of Medicine, Hangzhou, 310005, China.
Mei-Xin FangDivision/Center of Hematology-Oncology, Children's Hospital, Zhejiang University School of Medicine, Hangzhou, 310005, China.
He-Ping ShenDivision/Center of Hematology-Oncology, Children's Hospital, Zhejiang University School of Medicine, Hangzhou, 310005, China.
Chan LiaoDivision/Center of Hematology-Oncology, Children's Hospital, Zhejiang University School of Medicine, Hangzhou, 310005, China.
Ao DongNational Clinical Research Center for Child Health, Hangzhou, 310005, China.
Shan-Bo CaoDepartment of Medical Affairs, Acornmed Biotechnology Co., Ltd., Beijing, 100176, China.
Yong-Min TangDivision/Center of Hematology-Oncology, Children's Hospital, Zhejiang University School of Medicine, Hangzhou, 310005, China.
Xiao-Jun XuDivision/Center of Hematology-Oncology, Children's Hospital, Zhejiang University School of Medicine, Hangzhou, 310005, China. xuxiaojun@zju.edu.cn.

Funding

Natural Science Foundation of Zhejiang Province, China LY19H190005Pediatric Leukemia Diagnosis and Therapeutic Technology Research Center of Zhejiang Province JBZX-201904Zhejiang University Special Funds Project of Fundamental Research Funds 226-2022-00021
6 · The paper itself

Abstract

backgroundNUP98 rearrangements (NUP98-r) are rare but overrepresented mutations in pediatric acute myeloid leukemia (AML) patients. NUP98-r is often associated with chemotherapy resistance and a particularly poor prognosis. Therefore, characterizing pediatric AML with NUP98-r to identify aberrations is critically important.

methodsHere, we retrospectively analyzed the clinicopathological features, genomic and transcriptomic landscapes, treatments, and outcomes of pediatric patients with AML.

resultsNine patients with NUP98-r mutations were identified in our cohort of 142 patients. Ten mutated genes were detected in patients with NUP98-r. The frequency of FLT3-ITD mutations differed significantly between the groups harboring NUP98-r and those without NUP98-r (P = 0.035). Unsupervised hierarchical clustering via RNA sequencing data from 21 AML patients revealed that NUP98-r samples clustered together, strongly suggesting a distinct subtype. Compared with that in the non-NUP98-r fusion and no fusion groups, CMAHP expression was significantly upregulated in the NUP98-r samples (P < 0.001 and P = 0.001, respectively). Multivariate Cox regression analyses demonstrated that patients harboring NUP98-r (P < 0.001) and WT1 mutations (P = 0.030) had worse relapse-free survival, and patients harboring NUP98-r (P < 0.008) presented lower overall survival.

conclusionsThese investigations contribute to the understanding of the molecular characteristics, risk stratification, and prognostic evaluation of pediatric AML patients.

Indexed as

Leukemia, Myeloid, AcuteNuclear Pore Complex ProteinsAdolescentChildChild, PreschoolFemaleGene RearrangementHumansInfantMaleMutationPrognosisRetrospective StudiesTranscriptomenuclear pore complex protein 98Nuclear Pore Complex ProteinsNup98 protein, humanAcute myeloid leukemiaClinical featuresMolecular characteristicsNUP98 rearrangementTargeted next-generation sequencing

Identifiers

PMID39223643
PMCPMC11370121

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