Evidence map›Paper›PMID 39221771›Full record

ArticleAnnals of medicine2024

Molecular detection and genotyping of HMPV in patients with severe acute respiratory infection in India.

Pragathi P, Ujwal Shetty, Preetiparna Parida, Prasad Varamballi, Chiranjay Mukhopadhyay, Sudheesh N

Abstract read
In one paragraph

Article in Annals of medicine, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Burden of Human Metapneumovirus in India: Epidemiological Trends and Clinical Impact.Indian journal of community medicine : official publication of Indian Association of Preventive & Social Medicine · 2026
    Review
  5. Article
  6. Article
  7. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Pragathi PManipal Institute of Virology, Manipal Academy of Higher Education, Manipal, India.
Ujwal ShettyManipal Institute of Virology, Manipal Academy of Higher Education, Manipal, India.ORCID 0000-0002-7707-8186
Preetiparna ParidaManipal Institute of Virology, Manipal Academy of Higher Education, Manipal, India.ORCID 0009-0001-6144-185X
Prasad VaramballiManipal Institute of Virology, Manipal Academy of Higher Education, Manipal, India.ORCID 0000-0003-0384-1078
Chiranjay MukhopadhyayManipal Institute of Virology, Manipal Academy of Higher Education, Manipal, India.ORCID 0000-0003-0402-1143
Sudheesh NManipal Institute of Virology, Manipal Academy of Higher Education, Manipal, India.ORCID 0000-0002-3540-2865

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundHuman metapneumovirus (HMPV) is a common respiratory pathogen that causes respiratory tract infections. In India, HMPV has been identified as one of the leading causes of morbidity and mortality in infants and young children with respiratory tract infections. The most reported sublineages of HMPV in India are B1, B2, A2b and A2c.

objectiveA retrospective study was conducted to determine the circulating genotypes of HMPV among SARI cases from January 2016 to December 2018. MATERIALS AND

methodsPositive throat swab samples were confirmed with real-time RT-PCR. Subsequently, these samples were analysed using semi-nested conventional RT-PCR targeting the G gene, followed by sequencing and phylogenetic analysis. Clinical data analysis was also performed using SPSS 15.0 software.

resultsAll 20 samples from the SARI cases were classified under the A2c sublineage of HMPV. Phylogenetic analysis indicated that these strains were genetically related to those circulating in Japan, China, and Croatia. Among the samples, ten showed 111-nucleotide duplications, while the other ten had 180-nucleotide duplications.

conclusionClinical analysis showed that four cases had coinfections with other pathogens. Our extensive analysis of patient samples determined that HMPV, especially the A2c genotype, significantly contributed to SARI cases within our study population, which signifies the importance of considering HMPV as a probable aetiological agent when investigating SARI outbreaks.

Indexed as

GenotypeMetapneumovirusParamyxoviridae InfectionsPhylogenyRespiratory Tract InfectionsAcute DiseaseChildChild, PreschoolFemaleHumansIndiaInfantMaleReal-Time Polymerase Chain ReactionRetrospective Studiesclimate actiongood health and well-beingHMPVRT–PCRSARI

Identifiers

PMID39221771
PMCPMC11370674

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.