Evidence map›Paper›PMID 39221515›Full record

ArticleMagnetic resonance in medicine2025

Automated MRI-based segmentation of intracranial arterial calcification by restricting feature complexity.

Xin Wang, Gador Canton, Yin Guo, Kaiyu Zhang, Halit Akcicek, Ebru Yaman Akcicek, Thomas Hatsukami, Jin Zhang, Beibei Sun, Huilin Zhao and 5 more

Abstract read
In one paragraph

Article in Magnetic resonance in medicine, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Xin WangDepartment of Electrical and Computer Engineering, University of Washington, Seattle, Washington.ORCID 0000-0001-9546-6038
Gador CantonVascular Imaging Lab, Department of Radiology, University of Washington, Seattle, Washington.
Yin GuoDepartment of Bioengineering, University of Washington, Seattle, Washington.
Kaiyu ZhangDepartment of Bioengineering, University of Washington, Seattle, Washington.
Halit AkcicekDepartment of Radiology and Imaging Sciences, University of Utah, Salt Lake City, Utah.
Ebru Yaman AkcicekDepartment of Radiology and Imaging Sciences, University of Utah, Salt Lake City, Utah.ORCID 0000-0002-2413-0542
Thomas HatsukamiDepartment of Surgery, University of Washington, Seattle, Washington.
Jin ZhangDepartment of Radiology, Renji Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai, China.
Beibei SunDepartment of Radiology, Renji Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai, China.
Huilin ZhaoDepartment of Radiology, Renji Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai, China.
Yan ZhouDepartment of Radiology, Renji Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai, China.
Linda ShapiroPaul G. Allen School of Computer Science and Engineering, University of Washington, Seattle, Washington.
Mahmud Mossa-BashaVascular Imaging Lab, Department of Radiology, University of Washington, Seattle, Washington.
Chun YuanVascular Imaging Lab, Department of Radiology, University of Washington, Seattle, Washington.ORCID 0000-0002-6154-5106
Niranjan BaluVascular Imaging Lab, Department of Radiology, University of Washington, Seattle, Washington.

Funding

3D WALLI: MR intracranial vessel wall imaging for stroke preventionR01NS092207 · NINDS · UNIVERSITY OF WASHINGTON · PI MOSSA-BASHA, MAHMUD, YUAN, CHUN · 2016 to 2019
$3.1M
Quantitative model-based ESUS reclassification using cardiac and cerebral vessel wall MRIR01NS125635 · NINDS · UNIVERSITY OF WASHINGTON · PI AKOUM, NAZEM, MOSSA-BASHA, MAHMUD · 2022 to 2025
$3.0M
Automated Intracranial Vessel Wall Analysis Pipeline for Multi-contrast Multi-platform ApplicationsR01NS127317 · NINDS · UNIVERSITY OF WASHINGTON · PI MOSSA-BASHA, MAHMUD, YUAN, CHUN · 2022 to 2025
$2.2M
NIH HHS R01NS092207NIH HHS R01NS127317NINDS NIH HHS R01 NS092207NINDS NIH HHS R01 NS125635NINDS NIH HHS R01 NS127317
6 · The paper itself

Abstract

purposeTo develop an automated deep learning model for MRI-based segmentation and detection of intracranial arterial calcification.

methodsA novel deep learning model under the variational autoencoder framework was developed. A theoretically grounded dissimilarity loss was proposed to refine network features extracted from MRI and restrict their complexity, enabling the model to learn more generalizable MR features that enhance segmentation accuracy and robustness for detecting calcification on MRI.

resultsThe proposed method was compared with nine baseline methods on a dataset of 113 subjects and showed superior performance (for segmentation, Dice similarity coefficient: 0.620, area under precision-recall curve [PR-AUC]: 0.660, 95% Hausdorff Distance: 0.848 mm, Average Symmetric Surface Distance: 0.692 mm; for slice-wise detection, F1 score: 0.823, recall: 0.764, precision: 0.892, PR-AUC: 0.853). For clinical needs, statistical tests confirmed agreement between the true calcification volumes and predicted values using the proposed approach. Various MR sequences, namely T1, time-of-flight, and SNAP, were assessed as inputs to the model, and SNAP provided unique and essential information pertaining to calcification structures.

conclusionThe proposed deep learning model with a dissimilarity loss to reduce feature complexity effectively improves MRI-based identification of intracranial arterial calcification. It could help establish a more comprehensive and powerful pipeline for vascular image analysis on MRI.

Indexed as

Deep LearningMagnetic Resonance ImagingAdultAgedAlgorithmsBrainFemaleHumansImage Interpretation, Computer-AssistedImage Processing, Computer-AssistedMaleMiddle AgedVascular Calcificationcalcification segmentationdeep learninginformation bottleneckintracranial arteriesvariational autoencoders

Identifiers

PMID39221515
PMCPMC11518638

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.