Evidence map›Paper›PMID 39219981›Full record

ArticleProceedings of SPIE--the International Society for Optical Engineering2024

Nonlinear Gradient Field Estimation in Diffusion MRI Tensor Simulation.

Praitayini Kanakaraj, Tianyuan Yao, Nancy R Newlin, Leon Y Cai, Kurt G Schilling, Baxter P Rogers, Adam Anderson, Daniel Moyer, Bennett A Landman

Abstract read
In one paragraph

Article in Proceedings of SPIE--the International Society for Optical Engineering, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Praitayini KanakarajVanderbilt University, Nashville, TN, USA.
Tianyuan YaoVanderbilt University, Nashville, TN, USA.
Nancy R NewlinVanderbilt University, Nashville, TN, USA.
Leon Y CaiVanderbilt University Medical Center, Nashville, TN, USA.
Kurt G SchillingVanderbilt University Medical Center, Nashville, TN, USA.
Baxter P RogersVanderbilt University Medical Center, Nashville, TN, USA.
Adam AndersonVanderbilt University Medical Center, Nashville, TN, USA.
Daniel MoyerVanderbilt University, Nashville, TN, USA.
Bennett A LandmanVanderbilt University, Nashville, TN, USA.

Funding

VANDERBILT UNIVERSITY CTSA FOR PEDIATRIC RESEARCHUL1RR024975 · NCRR · VANDERBILT UNIVERSITY · PI BERNARD, GORDON RAPHAEL · 2007 to 2011
$45.7M
MEDICAL SCIENTIST TRAINING PROGRAMT32GM007347 · NIGMS · VANDERBILT UNIVERSITY · PI WILLIAMS, CHRISTOPHER S. · 1985 to 2023
$26.3M
Overall: Eunice Kennedy Shriver Intellectual and Developmental Disabilities Research Center at VanderbiltP50HD103537 · NICHD · VANDERBILT UNIVERSITY MEDICAL CENTER · PI Jeffrey L Neul · 2020 to 2026
$10.3M
Controlling Quality and Capturing Uncertainty in Advanced Diffusion Weighted MRIR01EB017230 · NIBIB · VANDERBILT UNIVERSITY · PI LANDMAN, BENNETT A. · 2015 to 2024
$5.1M
Medical Scientist Training ProgramT32GM152284 · NIGMS · VANDERBILT UNIVERSITY · PI Christopher S. Williams · 2024 to 2026
$4.8M
Microstructure and connectivity modeling from the cortex to the spinal cord in Multiple SclerosisK01EB032898 · NIBIB · VANDERBILT UNIVERSITY MEDICAL CENTER · PI SCHILLING, KURT G · 2022 to 2025
$630k
NCRR NIH HHS UL1 RR024975NIBIB NIH HHS K01 EB032898NIBIB NIH HHS R01 EB017230NICHD NIH HHS P50 HD103537NIGMS NIH HHS T32 GM007347NIGMS NIH HHS T32 GM152284
6 · The paper itself

Abstract

Gradient nonlinearities not only induce spatial distortion in magnetic resonance imaging (MRI), but also introduce discrepancies between intended and acquired diffusion sensitization in diffusion weighted (DW) MRI. Advances in scanner performance have increased the importance of correcting gradient nonlinearities. The most common approaches for gradient nonlinear field estimations rely on phantom calibration field maps which are not always feasible, especially on retrospective data. Here, we derive a quadratic minimization problem for the complete gradient nonlinear field (L(r)). This approach starts with corrupt diffusion signal and estimates the L(r) in two scenarios: (1) the true diffusion tensor known and (2) the true diffusion tensor unknown (i.e., diffusion tensor is estimated). We show the validity of this mathematical approach, both theoretically and through tensor simulation. The estimated field is assessed through diffusion tensor metrics: mean diffusivity (MD), fractional anisotropy (FA), and principal eigenvector (V1). In simulation with 300 diffusion tensors, the study shows the mathematical model is not ill-posed and remains stable. We find when the true diffusion tensor is known (1) the change in determinant of the estimated L(r) field and the true field is near zero and (2) the median difference in estimated L(r) corrected diffusion metrics to true values is near zero. We find the results of L(r) estimation are dependent on the level of L(r) corruption. This work provides an approach to estimate gradient field without the need for additional calibration scans.

Indexed as

gradient nonlinearityMagnetic resonance distortiontensor simulation

Identifiers

PMID39219981
PMCPMC11364409

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.