Evidence map›Paper›PMID 39217184›Full record

ArticleNature communications2024

Spatially structured exchange of metabolites enhances bacterial survival and resilience in biofilms.

Yuzhen Zhang, Yukmi Cai, Bing Zhang, Yi-Heng P Job Zhang

Abstract read
In one paragraph

Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Biofilm synergy byBiofilm · 2026
    Article
  10. Article
  11. Dynamic Cultivation ofFoods (Basel, Switzerland) · 2026
    Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Yuzhen Zhang *Key Laboratory of Engineering Biology for Low-Carbon Manufacturing, In Vitro Synthetic Biology Center, Tianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, Tianjin, China. zhangyzh@tib.cas.cn.ORCID 0000-0003-1112-0289
Yukmi Cai *Key Laboratory of Engineering Biology for Low-Carbon Manufacturing, In Vitro Synthetic Biology Center, Tianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, Tianjin, China.ORCID 0000-0003-3107-7038
Bing ZhangSchool of Information Science and Engineering, Yanshan University, Qinhuangdao, China.ORCID 0000-0002-9867-8439
Yi-Heng P Job ZhangKey Laboratory of Engineering Biology for Low-Carbon Manufacturing, In Vitro Synthetic Biology Center, Tianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, Tianjin, China. zhang_xw@tib.cas.cn.

Funding

National Nature Science Foundation of ChinaTianjin Synthetic Biotechnology Innovation Capacity Improvement Project, China
6 · The paper itself

Abstract

Biofilm formation enhances bacterial survival and antibiotic tolerance, but the underlying mechanisms are incompletely understood. Here, we show that biofilm growth is accompanied by a reduction in bacterial energy metabolism and membrane potential, together with metabolic exchanges between the inner and outer regions in biofilms. More specifically, nutrient-starved cells in the interior supply amino acids to cells in the periphery, while peripheral cells experience a decrease in membrane potential and provide fatty acids to interior cells. Fatty acids facilitate the repair of starvation-induced membrane damage in inner cells and enhance their survival in the presence of antibiotics. Thus, metabolic exchanges between inner and outer cells contribute to survival of the nutrient-starved inner cells and contribute to antibiotic tolerance within the biofilm.

Indexed as

Anti-Bacterial AgentsBiofilmsFatty AcidsAmino AcidsEnergy MetabolismMembrane PotentialsMicrobial ViabilityAmino AcidsAnti-Bacterial AgentsFatty Acids

Identifiers

PMID39217184
PMCPMC11366000

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.