Evidence map›Paper›PMID 39215490›Full record

ArticleAngewandte Chemie (International ed. in English)2025

Mirror-Image Random Nonstandard Peptides Integrated Discovery (MI-RaPID) Technology Yields Highly Stable and Selective Macrocyclic Peptide Inhibitors for Matrix Metallopeptidase 7.

Hiba Ghareeb, Choi Yi Li, Anjana Shenoy, Naama Rotenberg, Julia M Shifman, Takayuki Katoh, Irit Sagi, Hiroaki Suga, Norman Metanis

Abstract read
In one paragraph

Article in Angewandte Chemie (International ed. in English), 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Article
  2. Review
  3. Review
  4. De novo discovery of bicyclic cysteine-rich peptides targeting gasdermin D.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  5. Article
  6. Article
  7. Functional Ambidexterity of an Ancient Nucleic Acid-Binding Domain.Angewandte Chemie (International ed. in English) · 2025
    Article
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Hiba GhareebInstitute of Chemistry, The Center for Nanoscience and Nanotechnology, Casali Center of Applied Chemistry, The Hebrew University of Jerusalem, Jerusalem, 9190401, Israel.
Choi Yi LiDepartment of Chemistry, Graduate School of Science, The University of Tokyo, Tokyo, 113-0033 Japan.
Anjana ShenoyDepartment of Immunology and Regenerative Biology, Weizmann Institute of Science, Rehovot, IL76100, Israel.
Naama RotenbergDepartment of Biological Chemistry, The Alexander Silverman Institute of Life Science, The Hebrew University of Jerusalem, Jerusalem, 9190401, Israel.
Julia M ShifmanDepartment of Biological Chemistry, The Alexander Silverman Institute of Life Science, The Hebrew University of Jerusalem, Jerusalem, 9190401, Israel.
Takayuki KatohDepartment of Chemistry, Graduate School of Science, The University of Tokyo, Tokyo, 113-0033 Japan.
Irit SagiDepartment of Immunology and Regenerative Biology, Weizmann Institute of Science, Rehovot, IL76100, Israel.
Hiroaki SugaDepartment of Chemistry, Graduate School of Science, The University of Tokyo, Tokyo, 113-0033 Japan.
Norman MetanisInstitute of Chemistry, The Center for Nanoscience and Nanotechnology, Casali Center of Applied Chemistry, The Hebrew University of Jerusalem, Jerusalem, 9190401, Israel.ORCID https://orcid.org/0000-0002-6373-9318

Funding

Engineering tissue inhibitor of metalloproteinases-2 (TIMP-2) for triple negative breast cancer therapyR01CA258274 · NCI · MAYO CLINIC JACKSONVILLE · PI RADISKY, EVETTE S · 2021 to 2025
$1.6M
Targeting MT1-MMP to inhibit pathologic inflammation in TBR21AI146813 · NIAID · MASSACHUSETTS GENERAL HOSPITAL · PI BARCZAK, AMY K · 2019 to 2020
$418k
European Union's Horizon 2020 801126HORIZON EUROPE European Research Council 695437Israel Cancer Research FundIsrael Science Foundation 1388/22Israel Science Foundation 1800/19Israel Science Foundation 3486/20Japan Society for the Promotion of Science 23KF0020Japan Society for the Promotion of Science JP20H05618NCI NIH HHS R01 CA258274NIAID NIH HHS R21 AI146813NIH HHS 1R21AI146813United States - Israel Binational Science Foundation 2017207
6 · The paper itself

Abstract

Matrix metallopeptidase 7 (MMP7) plays a crucial role in cancer metastasis and progression, making it an attractive target for therapeutic development. However, the development of selective MMP7 inhibitors is challenging due to the conservation of active sites across various matrix metalloproteinases (MMPs). Here, we have developed mirror-image random nonstandard peptides integrated discovery (MI-RaPID) technology to discover innate protease-resistant macrocyclic peptides that specifically bind to and inhibit human MMP7. One identified macrocyclic peptide against D-MMP7, termed D20, was synthesized in its mirror-image form, D'20, consisting of 12 D-amino acids, one cyclic β-amino acid, and a thioether bond. Notably, it potently inhibited MMP7 with an IC

Indexed as

Drug DiscoveryMacrocyclic CompoundsMatrix Metalloproteinase 7Matrix Metalloproteinase InhibitorsPeptidesPeptides, CyclicCell MovementCell ProliferationCell SurvivalHumansMolecular StructureMacrocyclic CompoundsMatrix Metalloproteinase 7Matrix Metalloproteinase InhibitorsPeptidesPeptides, CyclicChemical protein synthesismatrix metalloproteinasesMirror image proteinsNative chemical ligationRandom Nonstandard Peptides Integrated Discovery (RaPID)

Identifiers

PMID39215490
PMCPMC11833282

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.