Evidence map›Paper›PMID 39214958›Full record

ArticleNature communications2024

Force and the α-C-terminal domains bias RNA polymerase recycling.

Jin Qian, Bing Wang, Irina Artsimovitch, David Dunlap, Laura Finzi

Abstract read
In one paragraph

Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Actuation of CRP activating region 3 by formylation modulates theProceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  2. Article
  3. MACRO-MOLECULAR CROWDING FAVORS WRITHE IN UNWOUND DNA.bioRxiv : the preprint server for biology · 2026
    Article
  4. Review
  5. Review
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Jin QianPhysics Department, Emory University, Atlanta, GA, USA.
Bing WangThe Center for RNA Biology and Department of Microbiology, The Ohio State University, Columbus, OH, USA.ORCID 0000-0003-1265-9526
Irina ArtsimovitchThe Center for RNA Biology and Department of Microbiology, The Ohio State University, Columbus, OH, USA.ORCID 0000-0002-8604-0980
David DunlapDepartment of Physics & Astronomy, Clemson University, Clemson, SC, USA.
Laura FinziDepartment of Physics & Astronomy, Clemson University, Clemson, SC, USA. lfinzi@clemson.edu.ORCID 0000-0003-1173-5339

Funding

Mechnanism of transcript elongation control by RfaHR01GM067153 · NIGMS · OHIO STATE UNIVERSITY · PI IRINA ARTSIMOVITCH · 2003 to 2026
$8.0M
The lambda bacteriophage regulatory loopR01GM084070 · NIGMS · EMORY UNIVERSITY · PI FINZI, LAURA · 2009 to 2021
$4.1M
Macromolecular Crowding effects on DNA mechanics, topology and transcriptionR35GM149296 · NIGMS · EMORY UNIVERSITY · PI Laura Finzi · 2023 to 2026
$1.5M
NIGMS NIH HHS R01 GM067153NIGMS NIH HHS R01 GM084070NIGMS NIH HHS R35 GM149296U.S. Department of Health & Human Services | NIH | National Institute of General Medical Sciences (NIGMS) R01GM067153U.S. Department of Health & Human Services | NIH | National Institute of General Medical Sciences (NIGMS) R01GM084070U.S. Department of Health & Human Services | NIH | National Institute of General Medical Sciences (NIGMS) R35GM149296
6 · The paper itself

Abstract

After an RNA polymerase reaches a terminator, instead of dissociating from the template, it may diffuse along the DNA and recommence RNA synthesis from the previous or a different promoter. Magnetic tweezers were used to monitor such secondary transcription and determine the effects of low forces assisting or opposing translocation, protein roadblocks, and transcription factors. Remarkably, up to 50% of Escherichia coli (E. coli) RNA polymerases diffused along the DNA after termination. Force biased the direction of diffusion (sliding) and the velocity increased rapidly with force up to 0.7 pN and much more slowly thereafter. Sigma factor 70 (σ

Indexed as

DNA-Directed RNA PolymerasesEscherichia coliEscherichia coli ProteinsPromoter Regions, GeneticSigma FactorDNA, BacterialLac RepressorsPeptide Elongation FactorsProtein DomainsTranscriptional Elongation FactorsTranscription FactorsTranscription, GeneticDNA, BacterialDNA-Directed RNA PolymerasesEscherichia coli ProteinsLac RepressorsNusG protein, E coliPeptide Elongation FactorsRNA polymerase sigma 70Sigma FactorTranscriptional Elongation FactorsTranscription Factors

Identifiers

PMID39214958
PMCPMC11364550

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.