Evidence map›Paper›PMID 39212683›Full record

ArticleAnnals of botany2024

Pectin-like heteroxylans in the early-diverging charophyte Klebsormidium fluitans.

Marie N Rapin, John H Bothwell, Stephen C Fry

Abstract read
In one paragraph

Article in Annals of botany, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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2 · The registry

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3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

3 authors.

Marie N RapinThe Edinburgh Cell Wall Group, Institute of Molecular Plant Sciences, The University of Edinburgh, Edinburgh EH9 3BF, UK.ORCID 0009-0003-3707-8426
John H BothwellDepartment of Biosciences, Durham University, Durham DH1 3LE, UK.ORCID 0000-0003-2964-5980
Stephen C FryThe Edinburgh Cell Wall Group, Institute of Molecular Plant Sciences, The University of Edinburgh, Edinburgh EH9 3BF, UK.ORCID 0000-0002-1820-4867

Funding

EPSRC Centre for Doctoral Training in Soft Matter and Functional Interfaces EP/S023631/1
6 · The paper itself

Abstract

BACKGROUND AND

aimsThe cell walls of charophytic algae both resemble and differ from those of land plants. Cell walls in early-diverging charophytes (e.g. Klebsormidiophyceae) are particularly distinctive in ways that might enable survival in environments that are incompatible with land-plant polymers. This study therefore investigates the structure of Klebsormidium polysaccharides.

methodsThe 'pectin' fraction (defined by extractability) of Klebsormidium fluitans, solubilized by various buffers from alcohol-insoluble residues, was digested with several treatments that (partly) hydrolyse land-plant cell-wall polysaccharides. Products were analysed by gel-permeation and thin-layer chromatography. KEY

resultsThe Klebsormidium pectic fraction made up ~30-50 % of its alcohol-insoluble residue, was optimally solubilized at pH 3-4 at 100 °C, and contained residues of xylose ≈ galactose > rhamnose > arabinose, fucose, mannose and glucose. Uronic acids were undetectable, and the pectic fraction was more readily solubilized by formate than by oxalate, suggesting a lack of chelation. Some land-plant-targeting hydrolases degraded the Klebsormidium pectic fraction: digestion by α-l-arabinanase, endo-β-(1→4)-d-xylanase and α-d-galactosidase suggests the presence of β-(1→4)-xylan with terminal α-l-arabinose, α-d-galactose and (unexpectedly) rhamnose. 'Driselase' released oligosaccharides of xylose and rhamnose (~1:1), and graded acid hydrolysis of these oligosaccharides indicated a 'rhamnoxylan' with rhamnose side-chains. Partial acid hydrolysis of Klebsormidium pectic fraction released rhamnose plus numerous oligosaccharides, one of which comprised xylose and galactose (~1:2 Gal/Xyl), suggesting a galactoxylan. Lichenase was ineffective, as were endo-β-(1→4)-d-galactanase, endo-β-(1→4)-d-mannanase, β-d-xylosidase and β-d-galactosidase.

conclusionsKlebsormidium pectic fraction possesses many land-plant-like linkages but is unusual in lacking uronic acid residues and in containing rhamnoxylan and galactoxylan domains. Uronic acids allow land-plant and late-diverging charophyte pectins to form Ca2+-bridges, facilitating cell-wall polymer association; their absence from Klebsormidium suggests that neutral heteroxylans rely on alternative cross-linking mechanisms. This lack of dependence on Ca2+-bridges might confer on Klebsormidium the ability to grow in the acidic, metal-rich environments that it tolerates.

Indexed as

PectinsXylansCell WallCharophyceaeHydrogen-Ion ConcentrationHydrolysisPolysaccharidesSolubilityPectinsPolysaccharidesXylansalgaecell wallcharophytegalactoxylanKlebsormidiumpectinpollution tolerancepolysacchariderhamnoxylanxylans

Identifiers

PMID39212683
PMCPMC11688530

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.