Evidence map›Paper›PMID 39211849›Full record

ArticlemedRxiv : the preprint server for health sciences2024

Assessment of genes involved in lysosomal diseases using the ClinGen Clinical Validity framework.

Emily Groopman, Shruthi Mohan, Amber Waddell, Matheus Wilke, Raquel Fernandez, Meredith Weaver, Hongjie Chen, Hongbin Liu, Deeksha Bali, Heather Baudet and 8 more

Abstract readPreprint
In one paragraph

Article in medRxiv : the preprint server for health sciences, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

18 authors.

Emily Groopman
Shruthi Mohan
Amber Waddell
Matheus Wilke
Raquel Fernandez
Meredith Weaver
Hongjie Chen
Hongbin Liu
Deeksha Bali
Heather Baudet
Lorne Clarke
Christina Hung
Rong Mao
Filippo Pinto E Vairo
Lemuel Racacho
Tatiana Yuzyuk
William J Craigen
Jennifer Goldstein

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Lysosomal diseases (LDs) are a heterogeneous group of rare genetic disorders that result in impaired lysosomal function, leading to progressive multiorgan system dysfunction. Accurate diagnosis is paramount to initiating targeted therapies early in the disease process in addition to providing prognostic information and appropriate support for families. In recent years, genomic sequencing technologies have become the first-line approach in the diagnosis of LDs. Understanding the clinical validity of the role of a gene in a disease is critical for the development of genomic technologies, such as which genes to include on next generation sequencing panels, and the interpretation of results from exome and genome sequencing. To this aim, the ClinGen Lysosomal Diseases Gene Curation Expert Panel utilized a semi-quantitative framework incorporating genetic and experimental evidence to assess the clinical validity of the 56 LD-associated genes on the Lysosomal Disease Network's list. Here, we describe the results, and the key themes and challenges encountered.

Identifiers

PMID39211849
PMCPMC11361216

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.