Evidence map›Paper›PMID 39211599›Full record

ArticleJACS Au2024

SHP-1 Variants Broaden the Understanding of pH-Dependent Activities in Protein Tyrosine Phosphatases.

Ruidan Shen, Alfie-Louise R Brownless, Nikolas Alansson, Marina Corbella, Shina C L Kamerlin, Alvan C Hengge

Abstract read
In one paragraph

Article in JACS Au, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
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  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Ruidan ShenDepartment of Chemistry and Biochemistry, Utah State University, Logan, Utah 84322-0300, United States.
Alfie-Louise R BrownlessSchool of Chemistry and Biochemistry, Georgia Institute of Technology, 901 Atlantic Drive NW, Atlanta, Georgia 30332-0400, United States.
Nikolas AlanssonSchool of Chemistry and Biochemistry, Georgia Institute of Technology, 901 Atlantic Drive NW, Atlanta, Georgia 30332-0400, United States.ORCID https://orcid.org/0000-0002-7815-9527
Marina CorbellaDepartament de Quımica Inorgànica i Orgànica (Secció de Quımica Orgànica) & Institut de Quımica Teòrica i Computacional (IQTCUB), Universitat de Barcelona, Martı i Franquès 1, 08028 Barcelona, Spain.ORCID https://orcid.org/0000-0001-9209-868X
Shina C L KamerlinSchool of Chemistry and Biochemistry, Georgia Institute of Technology, 901 Atlantic Drive NW, Atlanta, Georgia 30332-0400, United States.ORCID https://orcid.org/0000-0002-3190-1173
Alvan C HenggeDepartment of Chemistry and Biochemistry, Utah State University, Logan, Utah 84322-0300, United States.ORCID https://orcid.org/0000-0002-5696-2087

Funding

Integrative and Quantitative Biosciences Accelerated Training EnvironmentT32GM142616 · NIGMS · GEORGIA INSTITUTE OF TECHNOLOGY · PI James C. Gumbart, Peng Qiu · 2021 to 2026
$1.8M
NIGMS NIH HHS T32 GM142616
6 · The paper itself

Abstract

The protein tyrosine phosphatase (PTP) SHP-1 plays an important role in both immune regulation and oncogenesis. This enzyme is part of a broader family of PTPs that all play important regulatory roles in vivo. Common to these enzymes is a highly conserved aspartic acid (D421 in SHP-1) that acts as an acid/base catalyst during the PTP-catalyzed reaction. This residue is located on a mobile loop, the WPD-loop, the dynamic behavior of which is intimately connected to the catalytic activity. The SHP-1 WPD-loop variants H422Q, E427A, and S418A have been kinetically characterized and compared to those of the wild-type (WT) enzyme. These variants exhibit limiting magnitudes of

Identifiers

PMID39211599
PMCPMC11350601

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.