Evidence map›Paper›PMID 39209874›Full record

ArticleScientific data2024

Quantum Topological Atomic Properties of 44K molecules.

Brandon Meza-González, David I Ramírez-Palma, Pablo Carpio-Martínez, David Vázquez-Cuevas, Karina Martínez-Mayorga, Fernando Cortés-Guzmán

Abstract read
In one paragraph

Article in Scientific data, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Brandon Meza-GonzálezFacultad de Química, Universidad Nacional Autónoma de México, Ciudad de Méxinclude thexico, Mexico City, Mexico.
David I Ramírez-PalmaInstituto de Química, Unidad Mérida, Universidad Nacional Autónoma de México, Mérida, Yucatán, Mexico.ORCID http://orcid.org/0000-0003-3800-6611
Pablo Carpio-MartínezCentro Conjunto de Investigación en Química Sustentable UAEM-UNAM, Carretera Toluca-Atlacomulco, km. 14.5, Toluca, Estado de México, C.P. 50200, Mexico.
David Vázquez-CuevasInstituto de Química, Unidad Mérida, Universidad Nacional Autónoma de México, Mérida, Yucatán, Mexico.
Karina Martínez-MayorgaInstituto de Química, Unidad Mérida, Universidad Nacional Autónoma de México, Mérida, Yucatán, Mexico.
Fernando Cortés-GuzmánFacultad de Química, Universidad Nacional Autónoma de México, Ciudad de Méxinclude thexico, Mexico City, Mexico. fercor@unam.mx.

Funding

Consejo Nacional de Ciencia y Tecnología (National Council of Science and Technology, Mexico) CF2019-186 1561802/2020National Autonomous University of Mexico | Dirección General de Asuntos del Personal Académico, Universidad Nacional Autónoma de México (Dirección General Asuntos del Personal Académico, Universidad Nacional Autónoma de México) IN207822Universidad Nacional Autónoma de México (National Autonomous University of Mexico) LANCAD-UNAM-DGTIC-194)
6 · The paper itself

Abstract

We present a data set of quantum topological properties of atoms of 44K randomly selected molecules from the GDB-9 data set. These atomic properties were obtained as defined by the quantum theory of atoms in molecules (QTAIM) within an atomic basin, a region of real space bounded by zero-flux surfaces in the electron density gradient vector field. The wave function files were generated through DFT static calculations (B3LYP/6-31G), and the atomic properties were calculated using QTAIM. The calculated atomic properties include the energy of the atomic basin, the electronic population, the magnitude of the total dipole moment, and the magnitude of the total quadrupole moment. The atomic properties allow one to understand the chemical structure, reactivity, and molecular recognition. They can be incorporated into force fields for molecular dynamics or for predicting reactive sites. We believe that this data set could facilitate new studies in chemical informatics, machine learning applied to chemistry, and computational molecular design.

Identifiers

PMID39209874
PMCPMC11362522

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.