Evidence map›Paper›PMID 39209816›Full record

ArticleNature communications2024

The novel ribosome biogenesis inhibitor usnic acid blocks nucleolar pre-60S maturation.

Lisa Kofler, Lorenz Grundmann, Magdalena Gerhalter, Michael Prattes, Juliane Merl-Pham, Gertrude Zisser, Irina Grishkovskaya, Victor-Valentin Hodirnau, Martin Vareka, Rolf Breinbauer and 3 more

Abstract read
In one paragraph

Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Transcriptomic Analysis Reveals HowLife (Basel, Switzerland) · 2026
    Article
  3. Article
  4. Article
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Lisa Kofler *Institute of Molecular Biosciences, University of Graz, Graz, 8010, Austria.
Lorenz Grundmann *Research Institute of Molecular Pathology (IMP), Vienna BioCenter, Vienna, 1030, Austria.ORCID 0000-0002-0365-5913
Magdalena GerhalterInstitute of Molecular Biosciences, University of Graz, Graz, 8010, Austria.
Michael PrattesInstitute of Molecular Biosciences, University of Graz, Graz, 8010, Austria.ORCID 0000-0002-2526-9896
Juliane Merl-PhamCore Facility Metabolomics and Proteomics (CF-MPC), Helmholtz Center Munich, German Center for Environmental Health GmbH, D-80939, Munich, Germany.ORCID 0000-0002-3422-4083
Gertrude ZisserInstitute of Molecular Biosciences, University of Graz, Graz, 8010, Austria.
Irina GrishkovskayaResearch Institute of Molecular Pathology (IMP), Vienna BioCenter, Vienna, 1030, Austria.ORCID 0000-0003-0164-9373
Victor-Valentin HodirnauInstitute of Science and Technology Austria, Klosterneuburg, Austria.ORCID 0000-0003-3904-947X
Martin VarekaInstitute of Organic Chemistry, Graz University of Technology, Stremayrgasse 9, Graz, 8010, Austria.
Rolf BreinbauerInstitute of Organic Chemistry, Graz University of Technology, Stremayrgasse 9, Graz, 8010, Austria.ORCID 0000-0001-6009-7359
Stefanie M HauckCore Facility Metabolomics and Proteomics (CF-MPC), Helmholtz Center Munich, German Center for Environmental Health GmbH, D-80939, Munich, Germany.ORCID 0000-0002-1630-6827
David HaselbachResearch Institute of Molecular Pathology (IMP), Vienna BioCenter, Vienna, 1030, Austria. david.haselbach@imp.ac.at.ORCID 0000-0002-5276-5633
Helmut BerglerInstitute of Molecular Biosciences, University of Graz, Graz, 8010, Austria. helmut.bergler@uni-graz.at.ORCID 0000-0002-7724-309X

Funding

Austrian Science Fund (Fonds zur Förderung der Wissenschaftlichen Forschung) 29451Austrian Science Fund (Fonds zur Förderung der Wissenschaftlichen Forschung) 32536Austrian Science Fund (Fonds zur Förderung der Wissenschaftlichen Forschung) 32977Austrian Science Fund FWF P 32977
6 · The paper itself

Abstract

The formation of new ribosomes is tightly coordinated with cell growth and proliferation. In eukaryotes, the correct assembly of all ribosomal proteins and RNAs follows an intricate scheme of maturation and rearrangement steps across three cellular compartments: the nucleolus, nucleoplasm, and cytoplasm. We demonstrate that usnic acid, a lichen secondary metabolite, inhibits the maturation of the large ribosomal subunit in yeast. We combine biochemical characterization of pre-ribosomal particles with a quantitative single-particle cryo-EM approach to monitor changes in nucleolar particle populations upon drug treatment. Usnic acid rapidly blocks the transition from nucleolar state B to C of Nsa1-associated pre-ribosomes, depleting key maturation factors such as Dbp10 and hindering pre-rRNA processing. This primary nucleolar block rapidly rebounds on earlier stages of the pathway which highlights the regulatory linkages between different steps. In summary, we provide an in-depth characterization of the effect of usnic acid on ribosome biogenesis, which may have implications for its reported anti-cancer activities.

Indexed as

BenzofuransCell NucleolusCryoelectron MicroscopySaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsLichensRibosomal ProteinsRibosomesRibosome Subunits, LargeRibosome Subunits, Large, EukaryoticRNA PrecursorsRNA, RibosomalBenzofuransRibosomal ProteinsRNA PrecursorsRNA, RibosomalSaccharomyces cerevisiae Proteinsusnic acid

Identifiers

PMID39209816
PMCPMC11362459

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.