Evidence map›Paper›PMID 39209486›Full record

ArticleAJNR. American journal of neuroradiology2024

Using an Ensemble of Segmentation Methods to Detect Vertebral Bodies on Radiographs.

Brian C Chang, Jonathan Renslo, Qifei Dong, Sandra K Johnston, Jessica Perry, David R Haynor, Gang Luo, Nancy E Lane, Jeffrey G Jarvik, Nathan M Cross

Abstract readMulticenter Study
In one paragraph

Article in AJNR. American journal of neuroradiology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. The Osteoporotic Fractures in Men study (MrOS): a 25-yr landmark study of skeletal health in older men.Journal of bone and mineral research : the official journal of the American Society for Bone and Mineral Research · 2026
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Brian C ChangFrom the Departments of Biomedical Informatics and Medical Education (B.C.C., Q.D., G.L.), University of Washington, Seattle, Washington.ORCID 0000-0001-8327-2084
Jonathan RensloKeck School of Medicine (J.R.), University of Southern California, Los Angeles, California.
Qifei DongFrom the Departments of Biomedical Informatics and Medical Education (B.C.C., Q.D., G.L.), University of Washington, Seattle, Washington.
Sandra K JohnstonDepartments of Radiology (S.K.J., D.R.H., J.G.J., N.M.C.), University of Washington, Seattle, Washington.
Jessica PerryDepartments of Biostatistics (J.P.), University of Washington, Seattle, Washington.
David R HaynorDepartments of Radiology (S.K.J., D.R.H., J.G.J., N.M.C.), University of Washington, Seattle, Washington.
Gang LuoFrom the Departments of Biomedical Informatics and Medical Education (B.C.C., Q.D., G.L.), University of Washington, Seattle, Washington.
Nancy E LaneDepartment of Medicine (N.E.L.), Rheumatology, University of California Davis, Davis, California.
Jeffrey G JarvikDepartments of Radiology (S.K.J., D.R.H., J.G.J., N.M.C.), University of Washington, Seattle, Washington.ORCID 0000-0002-0528-3455
Nathan M CrossDepartments of Radiology (S.K.J., D.R.H., J.G.J., N.M.C.), University of Washington, Seattle, Washington nmcross@uw.edu.ORCID 0000-0002-5040-4340

Funding

Oregon Clinical and Translational Research InstituteUL1TR000128 · NCATS · OREGON HEALTH & SCIENCE UNIVERSITY · PI ELLISON, DAVID H · 2012 to 2015
$28.7M
University of Washington Biomedical Informatics and Data Science Research Training ProgramT15LM007442 · NLM · UNIVERSITY OF WASHINGTON · PI JOHN H. GENNARI, Andrea L. Hartzler · 2002 to 2026
$19.6M
Long term fracture risk and change in peripheral bone in the oldest old men: The MrOS studyR01AG066671 · NIA · CALIFORNIA PACIFIC MED CTR RES INSTITUTE · PI BOUXSEIN, MARY L, CAWTHON, PEGGY MANNEN · 2020 to 2024
$13.3M
Osteoporotic Fractures in Men (MrOS) - San Francisco Coordinating CenterU01AR066160 · NIAMS · CALIFORNIA PACIFIC MED CTR RES INSTITUTE · PI CUMMINGS, STEVEN RON · 2013 to 2017
$9.3M
UW Core Center for Clinical Research of Musculoskeletal ConditionsP30AR072572 · NIAMS · UNIVERSITY OF WASHINGTON · PI JEFFREY G JARVIK, Pradeep Suri · 2017 to 2026
$8.3M
Osteoporotic Fractures in Men (MrOS) - MinneapolisU01AG042145 · NIA · UNIVERSITY OF MINNESOTA · PI ENSRUD, KRISTINE · 2013 to 2019
$5.3M
Osteporotic Fractures in Men (MrOS)- Admin CenterU01AG027810 · NIA · OREGON HEALTH & SCIENCE UNIVERSITY · PI ORWOLL, ERIC S. · 2006 to 2017
$5.1M
Using Computational Approaches to Optimize Asthma Care ManagementR01HL142503 · NHLBI · UNIVERSITY OF WASHINGTON · PI LUO, GANG · 2018 to 2021
$3.3M
Osteoporotic Fractures in Men (MrOS) - PortlandU01AG042124 · NIA · OREGON HEALTH & SCIENCE UNIVERSITY · PI ORWOLL, ERIC S. · 2013 to 2019
$3.0M
Osteoporatic Fractures in Men (MrOS)U01AG042168 · NIA · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI KADO, DEBORAH · 2013 to 2017
$3.0M
Osteoporotic Fractures in Men (Mr. Os) Palo AltoU01AG042143 · NIA · STANFORD UNIVERSITY · PI STEFANICK, MARCIA L. · 2013 to 2017
$3.0M
Osteoporotic Fractures in Men (Mr.OS)U01AG042139 · NIA · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI CAULEY, JANE ANN · 2013 to 2017
$2.9M
NCATS NIH HHS UL1 TR000128NHLBI NIH HHS R01 HL142503NIAMS NIH HHS P30 AR072572NIAMS NIH HHS U01 AR066160NIA NIH HHS R01 AG066671NIA NIH HHS U01 AG027810NIA NIH HHS U01 AG042124NIA NIH HHS U01 AG042139NIA NIH HHS U01 AG042140NIA NIH HHS U01 AG042143NIA NIH HHS U01 AG042145NIA NIH HHS U01 AG042168NLM NIH HHS T15 LM007442
6 · The paper itself

Abstract

background and purposeVertebral compression fractures may indicate osteoporosis but are underdiagnosed and underreported by radiologists. We have developed an ensemble of vertebral body (VB) segmentation models for lateral radiographs as a critical component of an automated, opportunistic screening tool. Our goal is to detect the approximate location of thoracic and lumbar VBs, including fractured vertebra, on lateral radiographs. MATERIALS AND

methodsThe Osteoporotic Fractures in Men Study (MrOS) data set includes spine radiographs of 5994 men aged ≥65 years from 6 clinical centers. Two segmentation models, U-Net and Mask-RCNN (Region-based Convolutional Neural Network), were independently trained on the MrOS data set retrospectively, and an ensemble was created by combining them. Primary performance metrics for VB detection success included precision, recall, and F1 score for object detection on a held-out test set. Intersection over union (IoU) and Dice coefficient were also calculated as secondary metrics of performance for the test set. A separate external data set from a quaternary health care enterprise was acquired to test generalizability, comprising diagnostic clinical radiographs from men and women aged ≥65 years.

resultsThe trained models achieved F1 score of U-Net = 83.42%, Mask-RCNN = 86.30%, and ensemble = 88.34% in detecting all VBs, and F1 score of U-Net = 87.88%, Mask-RCNN = 92.31%, and ensemble = 97.14% in detecting severely fractured vertebrae. The trained models achieved an average IoU per VB of 0.759 for U-Net and 0.709 for Mask-RCNN. The trained models achieved F1 score of U-Net = 81.11%, Mask-RCNN = 79.24%, and ensemble = 87.72% in detecting all VBs in the external data set.

conclusionsAn ensemble model combining predictions from U-Net and Mask-RCNN resulted in the best performance in detecting VBs on lateral radiographs and generalized well to an external data set. This model could be a key component of a pipeline to detect fractures on all vertebrae in a radiograph in an automated, opportunistic screening tool under development.

Indexed as

Osteoporotic FracturesSpinal FracturesAgedAged, 80 and overFemaleFractures, CompressionHumansLumbar VertebraeMaleNeural Networks, ComputerRadiographic Image Interpretation, Computer-AssistedRetrospective StudiesThoracic VertebraeVertebral Body

Identifiers

PMID39209486
PMCPMC11448993

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.