ArticleJournal of the American Medical Informatics Association : JAMIA2024
Relation extraction using large language models: a case study on acupuncture point locations.
Article in Journal of the American Medical Informatics Association : JAMIA, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.
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Who cites it
19 citing papers in PubMed.
- Generative large language models in medicine: a scoping review of recent methodological advances.npj health systems · 2026Review
- Precision pharmacology: deep learning infused ontological framework with E-GRU enhancement for tailored medicine prescriptions.Scientific reports · 2026Article
- Structured taxonomy and framework for developing medical benchmark in large language models derived from scoping review.NPJ digital medicine · 2026Article
- Simultaneous multimodal detection of hand acupoints and reflex zones for acupuncture robots.iScience · 2026Article
- TCMEval-PA: a question-answering benchmark dataset for the prescription audit of Traditional Chinese Medicine.Scientific data · 2025Article
- Exploring multimodal large language models on transthoracic Echocardiogram (TTE) tasks for cardiovascular decision support.Journal of biomedical informatics · 2025Article
- Towards scalable and cross-lingual specialist language models for oncology.Scientific reports · 2025Article
- Evaluating the role of large language models in traditional Chinese medicine diagnosis and treatment recommendations.NPJ digital medicine · 2025Article
- A review of recent artificial intelligence for traditional medicine.Journal of traditional and complementary medicine · 2025Review
- Enhancing Relation Extraction for COVID-19 Vaccine Shot-Adverse Event Associations with Large Language Models.Research square · 2025Article
- Improving entity recognition using ensembles of deep learning and fine-tuned large language models: A case study on adverse event extraction from VAERS and social media.Journal of biomedical informatics · 2025Article
- Article
- Leveraging GPT-4o for Automated Extraction of Neural Projections from Scientific Literature.AMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science · 2025Article
- Artificial intelligence in acupuncture: bridging traditional knowledge and precision integrative medicine.Frontiers in medicine · 2025Review
- Evaluating the role of ChatGPT in rehabilitation medicine: a narrative review.Frontiers in digital health · 2025Review
- Article
- VaxBot-HPV: A GPT-based Chatbot for Answering HPV Vaccine-related Questions.Research square · 2024Article
- RefAI: a GPT-powered retrieval-augmented generative tool for biomedical literature recommendation and summarization.Journal of the American Medical Informatics Association : JAMIA · 2024Article
- Mapping vaccine names in clinical trials to vaccine ontology using cascaded fine-tuned domain-specific language models.Journal of biomedical semantics · 2024Article
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Abstract
objectiveIn acupuncture therapy, the accurate location of acupoints is essential for its effectiveness. The advanced language understanding capabilities of large language models (LLMs) like Generative Pre-trained Transformers (GPTs) and Llama present a significant opportunity for extracting relations related to acupoint locations from textual knowledge sources. This study aims to explore the performance of LLMs in extracting acupoint-related location relations and assess the impact of fine-tuning on GPT's performance. MATERIALS AND
methodsWe utilized the World Health Organization Standard Acupuncture Point Locations in the Western Pacific Region (WHO Standard) as our corpus, which consists of descriptions of 361 acupoints. Five types of relations ("direction_of", "distance_of", "part_of", "near_acupoint", and "located_near") (n = 3174) between acupoints were annotated. Four models were compared: pre-trained GPT-3.5, fine-tuned GPT-3.5, pre-trained GPT-4, as well as pretrained Llama 3. Performance metrics included micro-average exact match precision, recall, and F1 scores.
resultsOur results demonstrate that fine-tuned GPT-3.5 consistently outperformed other models in F1 scores across all relation types. Overall, it achieved the highest micro-average F1 score of 0.92. DISCUSSION: The superior performance of the fine-tuned GPT-3.5 model, as shown by its F1 scores, underscores the importance of domain-specific fine-tuning in enhancing relation extraction capabilities for acupuncture-related tasks. In light of the findings from this study, it offers valuable insights into leveraging LLMs for developing clinical decision support and creating educational modules in acupuncture.
conclusionThis study underscores the effectiveness of LLMs like GPT and Llama in extracting relations related to acupoint locations, with implications for accurately modeling acupuncture knowledge and promoting standard implementation in acupuncture training and practice. The findings also contribute to advancing informatics applications in traditional and complementary medicine, showcasing the potential of LLMs in natural language processing.
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