Evidence map›Paper›PMID 39207107›Full record

ArticlemBio2024

Classical swine fever virus inhibits serine metabolism-mediated antiviral immunity by deacetylating modified PHGDH.

Xiaowen Li, Yaoyao Huang, Xueyi Liu, Lihong Zhang, Xinyan Wang, Feifan Zhao, Linke Zou, Keke Wu, Wenxian Chen, Yuwei Qin and 11 more

Abstract read
In one paragraph

Article in mBio, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Review
  6. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors.

Xiaowen LiCollege of Veterinary Medicine, South China Agricultural University, Guangzhou, China.
Yaoyao HuangCollege of Veterinary Medicine, South China Agricultural University, Guangzhou, China.
Xueyi LiuCollege of Veterinary Medicine, South China Agricultural University, Guangzhou, China.
Lihong ZhangCollege of Veterinary Medicine, South China Agricultural University, Guangzhou, China.
Xinyan WangCollege of Veterinary Medicine, South China Agricultural University, Guangzhou, China.
Feifan ZhaoCollege of Veterinary Medicine, South China Agricultural University, Guangzhou, China.
Linke ZouCollege of Veterinary Medicine, South China Agricultural University, Guangzhou, China.
Keke WuCollege of Veterinary Medicine, South China Agricultural University, Guangzhou, China.
Wenxian ChenCollege of Veterinary Medicine, South China Agricultural University, Guangzhou, China.
Yuwei QinCollege of Veterinary Medicine, South China Agricultural University, Guangzhou, China.
Sen ZengCollege of Veterinary Medicine, South China Agricultural University, Guangzhou, China.
Bingke LiCollege of Veterinary Medicine, South China Agricultural University, Guangzhou, China.
Yintao HeCollege of Veterinary Medicine, South China Agricultural University, Guangzhou, China.
Yiwan SongCollege of Veterinary Medicine, South China Agricultural University, Guangzhou, China.
Zhaoyao LiCollege of Veterinary Medicine, South China Agricultural University, Guangzhou, China.
Jindai FanCollege of Veterinary Medicine, South China Agricultural University, Guangzhou, China.
Mingqiu ZhaoCollege of Veterinary Medicine, South China Agricultural University, Guangzhou, China.
Lin YiCollege of Veterinary Medicine, South China Agricultural University, Guangzhou, China.
Hongxing DingCollege of Veterinary Medicine, South China Agricultural University, Guangzhou, China.
Shuangqi FanCollege of Veterinary Medicine, South China Agricultural University, Guangzhou, China.ORCID 0000-0003-4447-2395
Jinding ChenCollege of Veterinary Medicine, South China Agricultural University, Guangzhou, China.ORCID 0000-0002-5435-0079

Funding

Double First Class discipline promotion project 2023B10564003Guangzhou Basic and Applied Basic Research Program 202201010489Major Project on Basic and Applied Basic Research in Guangdong Province 2020B0301030007National Key R and D Program 2021YFD1800300Quality and Efficiency Improvement Project of South China Agricultural University C18The Program of National Natural Science Foundation of China 32102643The Program of National Natural Science Foundation of China 32172824The Science and Technology Program of Guangzhou, China 202206010161
6 · The paper itself

Abstract

Classical swine fever virus (CSFV), an obligate intracellular pathogen, hijacks cellular metabolism to evade immune surveillance and facilitate its replication. The precise mechanisms by which CSFV modulates immune metabolism remain largely unknown. Our study reveals that CSFV infection disrupts serine metabolism, which plays a crucial role in antiviral immunity. Notably, we discovered that CSFV infection leads to the deacetylation of PHGDH, a key enzyme in serine metabolism, resulting in autophagic degradation. This deacetylation impairs PHGDH's enzymatic activity, reduces serine biosynthesis, weakens innate immunity, and promotes viral proliferation. Molecularly, CSFV infection induces the association of HDAC3 with PHGDH, leading to deacetylation at the K364 site. This modification attracts the E3 ubiquitin ligase RNF125, which facilitates the addition of K63-linked ubiquitin chains to PHGDH-K364R. Subsequently, PHGDH is targeted for lysosomal degradation by p62 and NDP52. Furthermore, the deacetylation of PHGDH disrupts its interaction with the NAD IMPORTANCE: Classical swine fever (CSF) seriously restricts the healthy development of China's aquaculture industry, and the unclear pathogenic mechanism and pathogenesis of classical swine fever virus (CSFV) are the main obstacle to CSF prevention, control, and purification. Therefore, it is of great significance to explore the molecular mechanism of CSFV and host interplay, to search for the key signaling pathways and target molecules in the host that regulate the replication of CSFV infection, and to elucidate the mechanism of action of host immune dysfunction and immune escape due to CSFV infection for the development of novel CSFV vaccines and drugs. This study reveals the mechanism of serine metabolizing enzyme post-translational modifications and antiviral signaling proteins in the replication of CSFV and enriches the knowledge of CSFV infection and immune metabolism.

Indexed as

Classical Swine Fever VirusImmunity, InnatePhosphoglycerate DehydrogenaseSerineAcetylationAnimalsClassical Swine FeverHost-Pathogen InteractionsSwineVirus ReplicationPhosphoglycerate DehydrogenaseSerineacetylationclassical swine fever virusinnate immunityPHGDHserine metabolism

Identifiers

PMID39207107
PMCPMC11481501

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.