Evidence map›Paper›PMID 39205239›Full record

ArticleViruses2024

A Retrospective Analysis Reveals That the 2021 Outbreaks of African Swine Fever Virus in Ghana Were Caused by Two Distinct Genotypes.

Ayushi Rai, Edward Spinard, Jehadi Osei-Bonsu, Amanda Meyers, Mark Dinhobl, Vivian O'Donnell, Patrick T Ababio, Daniel Tawiah-Yingar, Daniel Arthur, Daniel Baah and 8 more

Abstract read
In one paragraph

Article in Viruses, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors.

Ayushi RaiU.S. Department of Agriculture, Agricultural Research Service, Foreign Animal Disease Research Unit, Plum Island Animal Disease Center, Orient, NY 11957, USA.
Edward SpinardU.S. Department of Agriculture, Agricultural Research Service, Foreign Animal Disease Research Unit, Plum Island Animal Disease Center, Orient, NY 11957, USA.ORCID 0000-0001-7268-6580
Jehadi Osei-BonsuAccra Veterinary Laboratory of Veterinary Services Directorate, Accra P.O. Box GA184, Ghana.
Amanda MeyersU.S. Department of Agriculture, Agricultural Research Service, Foreign Animal Disease Research Unit, Plum Island Animal Disease Center, Orient, NY 11957, USA.
Mark DinhoblU.S. Department of Agriculture, Agricultural Research Service, Foreign Animal Disease Research Unit, Plum Island Animal Disease Center, Orient, NY 11957, USA.
Vivian O'DonnellU.S. Department of Agriculture, Animal and Plant Inspection Service, Plum Island Animal Disease Center, Greenport, NY 11944, USA.ORCID 0000-0002-7169-3954
Patrick T AbabioAccra Veterinary Laboratory of Veterinary Services Directorate, Accra P.O. Box GA184, Ghana.
Daniel Tawiah-YingarAccra Veterinary Laboratory of Veterinary Services Directorate, Accra P.O. Box GA184, Ghana.
Daniel ArthurAccra Veterinary Laboratory of Veterinary Services Directorate, Accra P.O. Box GA184, Ghana.
Daniel BaahAccra Veterinary Laboratory of Veterinary Services Directorate, Accra P.O. Box GA184, Ghana.
Elizabeth Ramirez-MedinaU.S. Department of Agriculture, Agricultural Research Service, Foreign Animal Disease Research Unit, Plum Island Animal Disease Center, Orient, NY 11957, USA.
Nallely EspinozaU.S. Department of Agriculture, Agricultural Research Service, Foreign Animal Disease Research Unit, Plum Island Animal Disease Center, Orient, NY 11957, USA.
Alyssa ValladaresU.S. Department of Agriculture, Agricultural Research Service, Foreign Animal Disease Research Unit, Plum Island Animal Disease Center, Orient, NY 11957, USA.
Bonto FaburayU.S. Department of Agriculture, Animal and Plant Inspection Service, National Bio and Agro-Defense Facility, Greenport, NY 11944, USA.
Aruna AmbagalaNational Centre for Foreign Animal Disease, Canadian Food Inspection Agency, Winnipeg, MB R3E 3M4, Canada.ORCID 0000-0003-1783-2105
Theophilus OdoomAccra Veterinary Laboratory of Veterinary Services Directorate, Accra P.O. Box GA184, Ghana.
Manuel V BorcaU.S. Department of Agriculture, Agricultural Research Service, Foreign Animal Disease Research Unit, Plum Island Animal Disease Center, Orient, NY 11957, USA.
Douglas P GladueU.S. Department of Agriculture, Agricultural Research Service, Foreign Animal Disease Research Unit, Plum Island Animal Disease Center, Orient, NY 11957, USA.ORCID 0000-0002-7894-0233

Funding

United states department of Agriculture CRIS 301-3022-505-63
6 · The paper itself

Abstract

African swine fever virus (ASFV) is the causative agent of African swine fever (ASF), a highly infectious and lethal disease of domesticated swine. Outbreaks of ASF have been mostly restricted to the continent of Africa. The outbreaks that have occurred outside of Africa were controlled by extensive depopulation of the domesticated pig population. However, in 2007, an outbreak occurred in the country of Georgia, where ASFV infected wild pigs and quickly spread across eastern Europe. Since the reintroduction of ASF into Europe, variants of the current pandemic strain, ASFV Georgia 2007/01 (ASFV-G), which is classified as Genotype 2 based on p72 sequencing, have been reported in countries within western Europe, Asia, and the island of Hispaniola. Additionally, isolates collected in 2020 confirmed the presence of variants of ASFV-G in Nigeria. Recently, we reported similar variants of ASFV-G collected from domestic pigs suspected of dying of ASF in Ghana in 2022. Here, we retroactively report, based on full-length sequencing, that similar variants were present in Ghana in 2021. The SNP analysis revealed derivatives of ASFV with distinct genetic markers. Furthermore, we identified three full-length ASFV genomes as Genotype 1, indicating that there were two genotypes circulating in proximity during the 2021 ASF outbreaks in Ghana.

Indexed as

African Swine FeverAfrican Swine Fever VirusDisease OutbreaksGenome, ViralGenotypePhylogenyAnimalsGenetic VariationGhanaRetrospective StudiesSwineAfrican swine feverASFVgenomeGhana

Identifiers

PMID39205239
PMCPMC11360390

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.