Evidence map›Paper›PMID 39202429›Full record

ArticleGenes2024

Whole Genome Analysis in Consanguineous Families Reveals New Loci for Speech Sound Disorder (SSD).

Tahira Yasmin, Aatika Sadia, Laraib Nadeem, Muhammad Asim Raza Basra, Mabel L Rice, Muhammad Hashim Raza

Abstract read
In one paragraph

Article in Genes, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Tahira YasminCentre for Clinical and Nutritional Chemistry, School of Chemistry, University of the Punjab, Lahore 54590, Pakistan.
Aatika SadiaCentre for Clinical and Nutritional Chemistry, School of Chemistry, University of the Punjab, Lahore 54590, Pakistan.ORCID 0000-0002-0579-7851
Laraib NadeemCentre for Clinical and Nutritional Chemistry, School of Chemistry, University of the Punjab, Lahore 54590, Pakistan.
Muhammad Asim Raza BasraCentre for Clinical and Nutritional Chemistry, School of Chemistry, University of the Punjab, Lahore 54590, Pakistan.
Mabel L RiceSpeech-Language-Hearing Sciences & Disorders, University of Kansas, Lawrence, KS 66045, USA.
Muhammad Hashim RazaSpeech-Language-Hearing Sciences & Disorders, University of Kansas, Lawrence, KS 66045, USA.ORCID 0000-0002-7027-5195

Funding

Genetic studies of specific language impairment (SLI) using consanguineousfamiliesR21DC017830 · NIDCD · UNIVERSITY OF KANSAS LAWRENCE · PI RAZA, MUHAMMAD HASHIM · 2020 to 2022
$440k
NIDCD NIH HHS R21 DC017830NIH HHS 1R21DC017830-20A1
6 · The paper itself

Abstract

Speech is the most common means of communication in humans. Any defect in accurate speech production ability results in the development of speech sound disorder (SSD), a condition that can significantly impair an individual's academic performance, social interactions, and relationships with peers and adults. This study investigated the genetic basis of SSD in three Pakistani families. We performed family-based genome-wide parametric linkage analysis and homozygosity mapping in three consanguineous families with SSD from the Punjab province of Pakistan. The Test for Assessment of Articulation and Phonology in Urdu (TAAPU) was used to analyze the speech articulation data and determine the Percentage Correct Consonants (PCC) score. The PCC score defined the affected and unaffected individuals in each family. Parametric linkage analysis revealed a linkage to chromosome 5 (5q21.3-5q23.1) with a significant logarithm of the odds (LOD) score of 3.13 in a Pakistani family with specific language impairment-97 (PKSLI-97) under an autosomal recessive mode of inheritance. The other two families showed a suggestive linkage at 6p22.1, 14q12, and 16q12.1 under the recessive mode of inheritance. Interestingly, homozygosity mapping showed a loss of heterozygosity in the linkage region at 5q15-5q23.1, shared among seven affected (mostly in the younger generation) and one unaffected individual of PKSLI-97. Our analysis identified the 6p22 locus previously implicated in dyslexia, childhood apraxia of speech (CAS), and language impairment, confirming the role of KIAA0319 and DCDC2 in this locus. These findings provide statistical evidence for the genomic regions associated with articulation disorder and offer future opportunities to further the role of genes in speech production.

Indexed as

ConsanguinityGenetic LinkagePedigreeSpeech Sound DisorderAdolescentAdultChildChromosome MappingChromosomes, Human, Pair 14Chromosomes, Human, Pair 16Chromosomes, Human, Pair 5FemaleGenome-Wide Association StudyHumansLod ScoreMalearticulationfamily-based linkage analysishomozygosity mappingPakistani familiesspeech sound disorder

Identifiers

PMID39202429
PMCPMC11354014

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.