Evidence map›Paper›PMID 39202403›Full record

ArticleGenes2024

Analysis of the miR482 Gene Family in Plants.

Wei Kuang, Danfeng Qin, Ying Huang, Yihua Liu, Xue Cao, Meng Xu

Abstract read
In one paragraph

Article in Genes, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Wei KuangCollege of Agriculture and Forestry Sciences, Linyi University, Linyi 276000, China.
Danfeng QinCollege of Agriculture and Forestry Sciences, Linyi University, Linyi 276000, China.
Ying HuangCollege of Agriculture and Forestry Sciences, Linyi University, Linyi 276000, China.
Yihua LiuCollege of Agriculture and Forestry Sciences, Linyi University, Linyi 276000, China.
Xue CaoCollege of Agriculture and Forestry Sciences, Linyi University, Linyi 276000, China.
Meng XuCollege of Agriculture and Forestry Sciences, Linyi University, Linyi 276000, China.ORCID 0000-0001-9964-1390

Funding

National Natural Science Foundation of China 31801868; 32302621, 32102405Natural Science Foundation of Shandong Province,China ZR2018PC023, ZR2021QC100, ZR2020QC156
6 · The paper itself

Abstract

MicroRNA482 (miR482) is a conserved microRNA family in plants, playing critical regulatory roles in different biological activities. Though the members of the miR482 gene family have been identified in plants, a systematic study has not been reported yet. In the present research, 140 mature sequences generated by 106 precursors were used for molecular characterization, phylogenetic analysis, and target gene prediction, and the competing endogenous RNA (ceRNA) network mediated by miR482 was summarized. The length of mature sequences ranged from 17 nt to 25 nt, with 22 nt being the most abundant, and the start and end of the mature sequences had a preference for uracil (U). By sequence multiplex comparison, it was found that the mature sequences of 5p were clustered into one group, and others were clustered into the other group. Phylogenetic analysis revealed that the 140 mature sequences were categorized into six groups. Meanwhile, all the precursor sequences formed a stable hairpin structure, and the 106 precursors were divided into five groups. However, the expression of miR482 varied significantly between different species and tissues. In total, 149 target genes were predicted and their functions focused on single-organism process, cellular process, and cell and cell part. The ceRNA network of miR482 in tomato, cotton, and peanut was summarized based on related publications. In conclusion, this research will provide a foundation for further understanding of the miR482 gene family.

Indexed as

Gene Expression Regulation, PlantMicroRNAsMultigene FamilyPhylogenyGene Regulatory NetworksPlantsRNA, PlantSolanum lycopersicumMicroRNAsRNA, PlantceRNA networkmiR482molecular characterizationphylogenetic evolutiontarget identification

Identifiers

PMID39202403
PMCPMC11353999

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.