Evidence map›Paper›PMID 39202389›Full record

ArticleGenes2024

De Novo Genome Assembly of

Julia V Gerasimova, Andreas Beck, Agnes Scheunert, Om Kulkarni

Abstract read
In one paragraph

Article in Genes, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Julia V GerasimovaDepartment of Lichenology and Bryology, Botanische Staatssammlung München, SNSB-BSM, 80638 Munich, Germany.ORCID 0000-0002-3212-3596
Andreas BeckDepartment of Lichenology and Bryology, Botanische Staatssammlung München, SNSB-BSM, 80638 Munich, Germany.ORCID 0000-0003-2875-4464
Agnes ScheunertGenomics Core Facility, Staatliche Naturwissenschaftliche Sammlungen Bayerns, SNSB-GCF, 80638 Munich, Germany.ORCID 0000-0001-7188-8797
Om KulkarniGenomics Core Facility, Staatliche Naturwissenschaftliche Sammlungen Bayerns, SNSB-GCF, 80638 Munich, Germany.ORCID 0000-0001-9045-1929

Funding

Bavarian Natural History Collections SNSB-GCF start up grantBavarian Natural History Collections SNSBinnovativ grant "Alpiner Endemismus" to A.B.
6 · The paper itself

Abstract

Lichens have developed numerous adaptations to optimize their survival in various environmental conditions, largely by producing secondary compounds by the fungal partner. They often have antibiotic properties and are involved in protection against intensive UV radiation, pathogens, and herbivores. To contribute to the knowledge of the arsenal of secondary compounds in a crustose lichen species, we sequenced and assembled the genome of

Indexed as

Genome, FungalLichensMelaninsAscomycotaBiosynthetic PathwaysFungal ProteinsMultigene FamilyPhylogenyPolyketidesFungal ProteinsMelaninsPolyketidesecologyfungal RiPP-like proteinsgenomicslichenlong-read sequencingsymbiosistype I polyketide gene

Identifiers

PMID39202389
PMCPMC11353741

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.