Evidence map›Paper›PMID 39202371›Full record

ArticleGenes2024

Whole-Exome Analysis for Polish Caucasian Patients with Retinal Dystrophies and the Creation of a Reference Genomic Database for the Polish Population.

Ewa Matczyńska, Robert Szymańczak, Katarzyna Stradomska, Przemysław Łyszkiewicz, Maria Jędrzejowska, Karolina Kamińska, Marta Beć-Gajowniczek, Ewa Suchecka, Marek Zagulski, Marta Wiącek and 6 more

Abstract read
In one paragraph

Article in Genes, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors.

Ewa MatczyńskaGenomed S.A., 02-971 Warsaw, Poland.ORCID 0000-0002-8893-3627
Robert SzymańczakGenomed S.A., 02-971 Warsaw, Poland.
Katarzyna StradomskaGenomed S.A., 02-971 Warsaw, Poland.
Przemysław ŁyszkiewiczGenomed S.A., 02-971 Warsaw, Poland.
Maria JędrzejowskaGenomed S.A., 02-971 Warsaw, Poland.
Karolina KamińskaGenomed S.A., 02-971 Warsaw, Poland.ORCID 0000-0002-4720-5527
Marta Beć-GajowniczekGenomed S.A., 02-971 Warsaw, Poland.
Ewa SucheckaGenomed S.A., 02-971 Warsaw, Poland.
Marek ZagulskiGenomed S.A., 02-971 Warsaw, Poland.
Marta WiącekFirst Department of Ophthalmology, Pomeranian Medical University, 70-204 Szczecin, Poland.ORCID 0000-0001-9416-5030
Edward WylęgałaChair and Clinical Department of Ophthalmology, Faculty of Medical Sciences in Zabrze, Medical University of Silesia, 40-055 Katowice, Poland.ORCID 0000-0002-6707-5790
Anna MachalińskaFirst Department of Ophthalmology, Pomeranian Medical University, 70-204 Szczecin, Poland.
Małgorzata MossakowskaStudy on Ageing and Longevity, International Institute of Molecular and Cell Biology, 02-109 Warsaw, Poland.ORCID 0000-0002-9340-3188
Monika Puzianowska-KuźnickaDepartment of Human Epigenetics, Mossakowski Medical Research Institute, Polish Academy of Sciences, 02-106 Warsaw, Poland.ORCID 0000-0001-5295-3848
Sławomir TeperChair and Clinical Department of Ophthalmology, Faculty of Medical Sciences in Zabrze, Medical University of Silesia, 40-055 Katowice, Poland.ORCID 0000-0002-0935-8880
Anna Boguszewska-ChachulskaGenomed S.A., 02-971 Warsaw, Poland.ORCID 0009-0004-5421-8678

Funding

Ministry of Science and Higher Education CTT/1874/2019National Centre for Research and Development INNOTECH-K2/IN2/10/181852/NCBR/13National Centre for Research and Development STRATEGMED1/234261/2/NCBR/2014
6 · The paper itself

Abstract

We present the results of the first study of a large cohort of patients with inherited retinal dystrophies (IRD) performed for the Polish population using whole-exome sequencing (WES) in the years 2016-2019. Moreover, to facilitate such diagnostic analyses and enable future application of gene therapy and genome editing for IRD patients, a Polish genomic reference database (POLGENOM) was created based on whole-genome sequences of healthy Polish Caucasian nonagenarians and centenarians. The newly constructed database served as a control, providing a comparison for variant frequencies in the Polish population. The diagnostic yield for the selected group of IRD patients reached 64.9%. The study uncovered the most common pathogenic variants in

Indexed as

Exome SequencingRetinal DystrophiesWhite PeopleAdultAgedAged, 80 and overATP-Binding Cassette Transporterscis-trans-IsomerasesDatabases, GeneticExtracellular Matrix ProteinsFemaleHumansMaleMiddle AgedMutationPolandABCA4 protein, humanATP-Binding Cassette Transporterscis-trans-IsomerasesExtracellular Matrix ProteinsRetinoid IsomerohydrolaseUSH2A protein, humaninherited retinal dystrophypopulation databaseretinitis pigmentosaWESWGS

Identifiers

PMID39202371
PMCPMC11353931

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.