Evidence map›Paper›PMID 39201707›Full record

ArticleInternational journal of molecular sciences2024

Molecular Signatures of CB-6644 Inhibition of the RUVBL1/2 Complex in Multiple Myeloma.

Weijun Yi, Sebastian A Dziadowicz, Rachel S Mangano, Lei Wang, Joseph McBee, Steven M Frisch, Lori A Hazlehurst, Donald A Adjeroh, Gangqing Hu

Abstract read
In one paragraph

Article in International journal of molecular sciences, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Weijun YiDepartment of Microbiology, Immunology & Cell Biology, West Virginia University, Morgantown, WV 26505, USA.
Sebastian A DziadowiczDepartment of Microbiology, Immunology & Cell Biology, West Virginia University, Morgantown, WV 26505, USA.
Rachel S ManganoDepartment of Microbiology, Immunology & Cell Biology, West Virginia University, Morgantown, WV 26505, USA.ORCID 0009-0001-4592-2047
Lei WangDepartment of Microbiology, Immunology & Cell Biology, West Virginia University, Morgantown, WV 26505, USA.
Joseph McBeeDepartment of Microbiology, Immunology & Cell Biology, West Virginia University, Morgantown, WV 26505, USA.
Steven M FrischDepartment of Biochemistry and Molecular Medicine, West Virginia University, Morgantown, WV 26506, USA.
Lori A HazlehurstDepartment of Pharmaceutical Sciences, School of Pharmacy, West Virginia University, Morganton, WV 26506, USA.ORCID 0000-0001-7040-4084
Donald A AdjerohLane Department of Computer Science & Electrical Engineering, West Virginia University, Morgantown, WV 26506, USA.
Gangqing HuDepartment of Microbiology, Immunology & Cell Biology, West Virginia University, Morgantown, WV 26505, USA.ORCID 0000-0001-5453-6888

Funding

West Virginia IDEA-CTRU54GM104942 · NIGMS · WEST VIRGINIA UNIVERSITY · PI JUDITH FEINBERG · 2012 to 2026
$81.0M
WV INBRE: The Inhibitor of Growth Family Member 4 (ING4) inhibits L-Type Amino Acid Transporter 1 (LAT1) expression to suppress Breast CancerP20GM103434 · NIGMS · MARSHALL UNIVERSITY · PI GARY O RANKIN · 2012 to 2026
$61.1M
WVU Flow Cytometry and Single Cell Core Facility (FCSCCF)P20GM121322 · NIGMS · WEST VIRGINIA UNIVERSITY · PI Karen H Martin · 2018 to 2026
$22.4M
National Science Foundation 2125872NIGMS NIH HHS P20 GM103434NIGMS NIH HHS P20 GM121322NIGMS NIH HHS U54 GM104942
6 · The paper itself

Abstract

Multiple myeloma is the second most hematological cancer. RUVBL1 and RUVBL2 form a subcomplex of many chromatin remodeling complexes implicated in cancer progression. As an inhibitor specific to the RUVBL1/2 complex, CB-6644 exhibits remarkable anti-tumor activity in xenograft models of Burkitt's lymphoma and multiple myeloma (MM). In this work, we defined transcriptional signatures corresponding to CB-6644 treatment in MM cells and determined underlying epigenetic changes in terms of chromatin accessibility. CB-6644 upregulated biological processes related to interferon response and downregulated those linked to cell proliferation in MM cells. Transcriptional regulator inference identified E2Fs as regulators for downregulated genes and MED1 and MYC as regulators for upregulated genes. CB-6644-induced changes in chromatin accessibility occurred mostly in non-promoter regions. Footprinting analysis identified transcription factors implied in modulating chromatin accessibility in response to CB-6644 treatment, including ATF4/CEBP and IRF4. Lastly, integrative analysis of transcription responses to various chemical compounds of the molecular signature genes from public gene expression data identified CB-5083, a p97 inhibitor, as a synergistic candidate with CB-6644 in MM cells, but experimental validation refuted this hypothesis.

Indexed as

ATPases Associated with Diverse Cellular ActivitiesDNA HelicasesGene Expression Regulation, NeoplasticMultiple MyelomaAntineoplastic AgentsCarrier ProteinsCell Line, TumorCell ProliferationChromatin Assembly and DisassemblyEpigenesis, GeneticHumansTranscription FactorsAntineoplastic AgentsATPases Associated with Diverse Cellular ActivitiesCarrier ProteinsDNA HelicasesRUVBL1 protein, humanRUVBL2 protein, humanTranscription FactorsCB-6644molecular signaturesmultiple myelomaRUVBL1/2

Identifiers

PMID39201707
PMCPMC11354775

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.