Evidence map›Paper›PMID 39201558›Full record

ArticleInternational journal of molecular sciences2024

Structural and Mechanistic Insights into a Novel Monooxygenase for Poly(acrylic acid) Biodegradation.

Rui Feng, Juyi Zhao, Xiaochen Li, Sijun Dong, Dan Ma

Abstract read
In one paragraph

Article in International journal of molecular sciences, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

What it found

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2 · The registry

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3 · Its place in the literature

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0 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

5 authors.

Rui FengCollege of Life Sciences, Hebei Basic Science Center for Biotic Interaction, Hebei University, Baoding 071002, China.
Juyi ZhaoCollege of Life Sciences, Hebei Basic Science Center for Biotic Interaction, Hebei University, Baoding 071002, China.
Xiaochen LiCollege of Life Sciences, Hebei Basic Science Center for Biotic Interaction, Hebei University, Baoding 071002, China.
Sijun DongCollege of Life Sciences, Hebei Basic Science Center for Biotic Interaction, Hebei University, Baoding 071002, China.
Dan MaCollege of Life Sciences, Hebei Basic Science Center for Biotic Interaction, Hebei University, Baoding 071002, China.ORCID 0000-0003-0593-397X

Funding

Excellent Youth Research Innovation Team of Hebei University QNTD202401National Natural Science Foundation of China 32101371Post-graduate's Innovation Fund Project of Hebei University HBU2023BS003Project Proposal for the Launch of Research Projects for High-Level Talents of Hebei University 521100223211Science Research Project of Hebei Education Department QN2024104
6 · The paper itself

Abstract

Polyacrylamide (PAM) is a high-molecular-weight polymer with extensive applications. However, the inefficient natural degradation of PAM results in environmental accumulation of the polymer. Biodegradation is an environmentally friendly approach in the field of PAM treatment. The first phase of PAM biodegradation is the deamination of PAM, forming the product poly(acrylic acid) (PAA). The second phase of PAM biodegradation involves the cleavage of PAA into small molecules, which is a crucial step in the degradation pathway of PAM. However, the enzyme that catalyzes the degradation of PAA and the molecular mechanism remain unclear. Here, a novel monooxygenase PCX02514 is identified as the key enzyme for PAA degradation. Through biochemical experiments, the monooxygenase PCX02514 oxidizes PAA with the participation of NADPH, causing the cleavage of carbon chains and a decrease in the molecular weight of PAA. In addition, the crystal structure of the monooxygenase PCX02514 is solved at a resolution of 1.97 Å. The active pocket is in a long cavity that extends from the C-terminus of the TIM barrel to the protein surface and exhibits positive electrostatic potential, thereby causing the migration of oxygen-negative ions into the active pocket and facilitating the reaction between the substrates and monooxygenase PCX02514. Moreover, Arg10-Arg125-Ser186-Arg187-His253 are proposed as potential active sites in monooxygenase PCX02514. Our research characterizes the molecular mechanism of this monooxygenase, providing a theoretical basis and valuable tools for PAM bioremediation.

Indexed as

Acrylic ResinsBiodegradation, EnvironmentalMixed Function OxygenasesCatalytic DomainCrystallography, X-RayModels, MolecularPolyacrylamidesProtein ConformationAcrylic Resinscarbopol 940Mixed Function OxygenasesPolyacrylamidesbiodegradationcrystal structuremolecular mechanismmonooxygenasepolyacrylamidepoly(acrylic acid)

Identifiers

PMID39201558
PMCPMC11354265

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.