Evidence map›Paper›PMID 39199384›Full record

ArticleBiomolecules2024

Discovery and Validation of Methylation Signatures in Circulating Cell-Free DNA for the Detection of Colorectal Cancer.

Zhiping Long, Yu Gao, Zhen Han, Heli Yuan, Yue Yu, Bing Pei, Yanjie Jia, Jingyu Ye, Ying Shi, Min Zhang and 3 more

Abstract read
In one paragraph

Article in Biomolecules, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Review
  2. Article
  3. Review
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Zhiping LongDepartment of Epidemiology, School of Public Health, Harbin Medical University, Harbin 150028, China.
Yu GaoDepartment of Epidemiology, School of Public Health, Harbin Medical University, Harbin 150028, China.
Zhen HanDepartment of Epidemiology, School of Public Health, Harbin Medical University, Harbin 150028, China.
Heli YuanDepartment of Epidemiology, School of Public Health, Harbin Medical University, Harbin 150028, China.
Yue YuDepartment of Epidemiology, School of Public Health, Harbin Medical University, Harbin 150028, China.
Bing PeiDepartment of Epidemiology, School of Public Health, Harbin Medical University, Harbin 150028, China.
Yanjie JiaDepartment of Epidemiology, School of Public Health, Harbin Medical University, Harbin 150028, China.
Jingyu YeDepartment of Epidemiology, School of Public Health, Harbin Medical University, Harbin 150028, China.
Ying ShiDepartment of Epidemiology, School of Public Health, Harbin Medical University, Harbin 150028, China.
Min ZhangDepartment of Epidemiology, School of Public Health, Harbin Medical University, Harbin 150028, China.
Yashuang ZhaoDepartment of Epidemiology, School of Public Health, Harbin Medical University, Harbin 150028, China.ORCID 0000-0002-7425-5773
Di WuDepartment of Colorectal Surgery, Tumor Hospital of Harbin Medical University, Harbin Medical University, Harbin 150081, China.
Fan WangDepartment of Epidemiology, School of Public Health, Harbin Medical University, Harbin 150028, China.ORCID 0000-0002-9869-9504

Funding

Fan Wang 81773503, 81573147, and 81473055Fan Wang for Youths, QC2018111Fan Wang LC2018033
6 · The paper itself

Abstract

This study was conducted with the primary objective of assessing the performance of cfDNA methylation in the detection of colorectal cancer (CRC). Five tumor tissue, 20 peripheral blood leucocyte, and 169 cfDNA samples were collected for whole-genome bisulfite sequencing (WGBS) analysis. Bioinformatic analysis was conducted to identify differentially methylated regions (DMRs) and their functional characteristics. Quantitative methylation-specific PCR (qMSP) was used to validate the methylation levels of DMRs in the tissues and leucocytes. cfDNA samples from CRC patients and healthy controls were used to evaluate the performance of the DMR analysis. WGBS analysis revealed a decrease in DNA methylation levels in the CpG context in CRC tumor tissues compared with adjacent normal tissues. A total of 132 DMRs in cfDNA were identified as potential markers for diagnosing CRC. In a cohort of 95 CRC patients and 74 healthy controls, a combination of the three DMRs (

Indexed as

Biomarkers, TumorCell-Free Nucleic AcidsColorectal NeoplasmsDNA MethylationAgedCase-Control StudiesCpG IslandsFemaleHumansMaleMiddle AgedBiomarkers, TumorCell-Free Nucleic AcidsbiomarkerscfDNAcolorectal cancermethylationWGBS

Identifiers

PMID39199384
PMCPMC11353097

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.