Evidence map›Paper›PMID 39198997›Full record

ArticleAnnals of clinical and translational neurology2024

Inferring disease course from differential exon usage in the wide titinopathy spectrum.

Maria Francesca Di Feo, Ali Oghabian, Ella Nippala, Mathias Gautel, Heinz Jungbluth, Francesca Forzano, Edoardo Malfatti, Claudia Castiglioni, Ilona Krey, David Gomez Andres and 25 more

Erratum issuedAbstract read
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Article in Annals of clinical and translational neurology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

35 authors.

Maria Francesca Di FeoDepartment of Neuroscience, Rehabilitation, Ophthalmology, Genetics, and Maternal and Child Health (DINOGMI), University of Genoa, Genoa, Italy.ORCID 0000-0002-4090-9521
Ali OghabianFolkhälsan Research Center, Helsinki, Uusimaa, Finland.
Ella NippalaFolkhälsan Research Center, Helsinki, Uusimaa, Finland.
Mathias GautelRandall Division of Cell and Molecular Biophysics and Cardiovascular Division, King's College London BHF Centre of Research Excellence, London, UK.
Heinz JungbluthRandall Division of Cell and Molecular Biophysics and Cardiovascular Division, King's College London BHF Centre of Research Excellence, London, UK.
Francesca ForzanoClinical Genetics Department, Guy's and St Thomas NHS Foundation Trust, London, SE1 9RT, UK.
Edoardo MalfattiUniversité Paris Est Créteil, INSERM, U955, IMRB, and Reference Center for Neuromuscular Disorders, APHP Henri Mondor University Hospital, Créteil, France.ORCID 0000-0001-7871-8600
Claudia CastiglioniClinica MEDS, Santiago de Chile, Chile.
Ilona KreyInstitute of Human Genetics, University of Leipzig Hospitals and Clinics, Leipzig, 4275, Germany.
David Gomez AndresChild Neurology Unit. Hospital Universitari Vall d'Hebron, Vall d'Hebron Research Institute (VHIR), Barcelona, Spain.
Angela F BradyNorth West Thames Regional Service, Northwick Park and St. Mark's Hospitals, Harrow, London, UK.
Maria IasconeMedical Genetics Laboratory, ASST Papa Giovanni XXIII, Bergamo, Italy.
Anna CeredaClinical Genetics Service, Pediatria 1-ASST Papa Giovanni XXIII, Bergamo, Italy.
Lidia PezzaniClinical Genetics Service, Pediatria 1-ASST Papa Giovanni XXIII, Bergamo, Italy.
Daniel Natera De BenitoNeuropaediatrics Department, Hospital Sant Joan De Déu, Institut De Recerca Sant Joan De Déu, Barcelona, 08950, Spain.ORCID 0000-0001-7764-2085
Andres Nascimiento OsorioNeuropaediatrics Department, Hospital Sant Joan De Déu, Institut De Recerca Sant Joan De Déu, Barcelona, 08950, Spain.
Berta Estévez AriasNeuromuscular Unit, Department of Neurology, Hospital Sant Joan De Déu, Barcelona, Spain.
Sergei A KurbatovVoronezh NN Burdenko State Medical University, Voronezh, 394036, Russia.
Tania Attie-BitachUnité D'embryofoetopathologie, Service D'histologie-Embryologie-Cytogénétique, Hôpital Necker-Enfants Malades, Paris, France.
Sheela NampoothiriDepartment of Pediatric Genetics, Amrita Institute of Medical Sciences & Research Centre, Kochi, Kerala, India.
Erin RyanGeneDx, Gaithersburg, Maryland, USA.
Michelle MorrowGeneDx, Gaithersburg, Maryland, USA.
Svetlana GorokhovaMarseille Medical Genetics, Aix Marseille Université, Faculté Des Sciences Médicales Et Paramédicales, Marseille, France.ORCID 0000-0001-6870-4061
Brigitte ChabrolReference Center for Inherited Metabolic Diseases, Marseille University Hospital, Marseille, France.
Juha SinisaloHelsinki University Central Hospital, Helsinki, Finland.
Heli TolppanenHelsinki University Central Hospital, Helsinki, Finland.
Johanna TolvaTransplantation Laboratory, Department of Pathology, University of Helsinki, Helsinki, Finland.
Francina MunellUnitat De Malalties Neuromusculars Pediàtriques, Hospital Universitari Vall D'Hebron, Barcelona, Spain.
Jessica Camacho SorianoHistology Department, Vall D'Hebron University Hospital, Barcelona, Spain.
Maria Angeles Sanchez DuranMaternal Fetal Medicine Unit, Department of Obstetrics, Universitat Autònoma de Barcelona, Hospital Vall D'Hebron, Barcelona, Spain.
Mridul JohariFolkhälsan Research Center, Helsinki, Uusimaa, Finland.ORCID 0000-0002-3549-558X
Homa TajsharghiDivision of Biomedicine, School of Health Sciences, University of Skovde, Skovde, Sweden.ORCID 0000-0001-8854-5213
Peter HackmanFolkhälsan Research Center, Helsinki, Uusimaa, Finland.
Bjarne Udd *Folkhälsan Research Center, Helsinki, Uusimaa, Finland.
Marco Savarese *Folkhälsan Research Center, Helsinki, Uusimaa, Finland.ORCID 0000-0002-2591-244X

Funding

European Research Council European Joint Program on Rare Diseases (project IFrench Muscular Dystrophy Association 23281Instituto de Salud Carlos III AC19/00048Jane ja Aatos Erkon SäätiöJuselius FoundationMagnus Ehrnroothin SäätiöResearch Council of Finland 339437Samfundet Folkhälsan i Svenska FinlandSydäntutkimussäätiö
6 · The paper itself

Abstract

objectiveBiallelic titin truncating variants (TTNtv) have been associated with a wide phenotypic spectrum, ranging from complex prenatal muscle diseases with dysmorphic features to adult-onset limb-girdle muscular dystrophy, with or without cardiac involvement. Given the size and complexity of TTN, reaching an unequivocal molecular diagnosis and precise disease prognosis remains challenging.

methodsIn this case series, 12 unpublished cases and one already published case with biallelic TTNtv were collected from multiple international medical centers between November 2022 and September 2023. TTN mutations were detected through exome or genome sequencing. Information about familial and personal clinical history was collected in a standardized form. RNA-sequencing and analysis of TTN exon usage were performed on an internal sample cohort including postnatal skeletal muscles, fetal skeletal muscles, postnatal heart muscles, and fetal heart muscles. In addition, publicly available RNA-sequencing data was retrieved from ENCODE.

resultsWe generated new RNA-seq data on TTN exons and identified genotype-phenotype correlations with prognostic implications for each titinopathy patient (whether worsening or improving in prenatal and postnatal life) using percentage spliced in (PSI) data for the involved exons. Interestingly, thanks to exon usage, we were also able to rule out a titinopathy diagnosis in one prenatal case.

interpretationThis study demonstrates that exon usage provides valuable insights for a more exhaustive clinical interpretation of TTNtv; additionally, it may serve as a model for implementing personalized medicine in many other genetic diseases, since most genes undergo alternative splicing.

Indexed as

ConnectinExonsAdolescentAdultChildChild, PreschoolDisease ProgressionFemaleHumansMaleMuscle, SkeletalMutationConnectinTTN protein, human

Identifiers

PMID39198997
PMCPMC11514934

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.