Evidence map›Paper›PMID 39196624›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2024

Stabilization of interdomain closure by a G protein inhibitor.

Tyson D Todd, Neha Vithani, Sukrit Singh, Gregory R Bowman, Kendall J Blumer, Andrea Soranno

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Article
  3. Cyclic peptide inhibitors function as molecular glues to stabilize Gq/11 heterotrimers.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  4. Article
  5. The G protein inhibitor YM-254890 is an allosteric glue.bioRxiv : the preprint server for biology · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Tyson D ToddDepartment of Cell Biology and Physiology, Washington University in St. Louis, Saint Louis, MO 63110.ORCID 0000-0002-9044-8313
Neha VithaniDepartment of Biochemistry and Molecular Biophysics, Washington University in St. Louis, Saint Louis, MO 63110.
Sukrit SinghDepartment of Biochemistry and Molecular Biophysics, Washington University in St. Louis, Saint Louis, MO 63110.ORCID 0000-0003-1914-4955
Gregory R BowmanDepartment of Biochemistry and Molecular Biophysics, Washington University in St. Louis, Saint Louis, MO 63110.ORCID 0000-0002-2083-4892
Kendall J BlumerDepartment of Cell Biology and Physiology, Washington University in St. Louis, Saint Louis, MO 63110.ORCID 0000-0002-5743-6206
Andrea SorannoDepartment of Biochemistry and Molecular Biophysics, Washington University in St. Louis, Saint Louis, MO 63110.ORCID 0000-0001-8394-7993

Funding

PHARMACOLOGICAL TARGETING OF GALPHA SUBUNITS IN DISEASER01GM124093 · NIGMS · WASHINGTON UNIVERSITY · PI BLUMER, KENDALL J, MOELLER, KEVIN DAVID · 2017 to 2024
$3.6M
HHS | NIH | National Institute of General Medical Sciences (NIGMS) R01GM124093NIGMS NIH HHS R01 GM124093
6 · The paper itself

Abstract

Inhibitors of heterotrimeric G proteins are being developed as therapeutic agents. Epitomizing this approach are YM-254890 (YM) and FR900359 (FR), which are efficacious in models of thrombosis, hypertension, obesity, asthma, uveal melanoma, and pain, and under investigation as an FR-antibody conjugate in uveal melanoma clinical trials. YM/FR inhibits the Gq/11/14 subfamily by interfering with GDP (guanosine diphosphate) release, but by an unknown biophysical mechanism. Here, we show that YM inhibits GDP release by stabilizing closure between the Ras-like and α-helical domains of a Gα subunit. Nucleotide-free Gα adopts an ensemble of open and closed configurations, as indicated by single-molecule Förster resonance energy transfer and molecular dynamics simulations, whereas GDP and GTPγS (guanosine 5'-O-[gamma-thio]triphosphate) stabilize distinct closed configurations. YM stabilizes closure in the presence or absence of GDP without requiring an intact interdomain interface. All three classes of mammalian Gα subunits that are insensitive to YM/FR possess homologous but degenerate YM/FR binding sites, yet can be inhibited upon transplantation of the YM/FR binding site of Gq. Novel YM/FR analogs tailored to each class of G protein will provide powerful new tools for therapeutic investigation.

Indexed as

Guanosine DiphosphateDepsipeptidesFluorescence Resonance Energy TransferGTP-Binding Protein alpha SubunitsHumansMolecular Dynamics SimulationPeptides, CyclicProtein BindingProtein DomainsDepsipeptidesFR900359GTP-Binding Protein alpha SubunitsGuanosine DiphosphatePeptides, CyclicYM-254890FRETG proteinG protein inhibitormolecular dynamicssingle-molecule

Identifiers

PMID39196624
PMCPMC11388362

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.