Evidence map›Paper›PMID 39196430›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2024

Genome-wide association study and selective sweep analysis uncover candidate genes controlling curd branch length in cauliflower.

Yingxia Yang, Yutong Guo, Jing Wang, Wenjuan Cheng, Mingjie Lyu, Qian Wang, Jianjin Wu, Mingyan Hua, Weihua Zhang, Deling Sun and 3 more

Abstract read
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Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

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4 · The record

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PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Yingxia Yang *State Key Laboratory of Vegetable Biobreeding, Tianjin Academy of Agricultural Sciences, Tianjin, 300192, China.ORCID https://orcid.org/0000-0002-5153-5940
Yutong Guo *State Key Laboratory of Vegetable Biobreeding, Tianjin Academy of Agricultural Sciences, Tianjin, 300192, China.
Jing WangNational Key Laboratory of Crop Genetic Improvement, National Center of Oil Crop Improvement (Wuhan), College of Plant Science and Technology, Huazhong Agricultural University, Wuhan, 430070, China.
Wenjuan ChengState Key Laboratory of Vegetable Biobreeding, Tianjin Academy of Agricultural Sciences, Tianjin, 300192, China.
Mingjie LyuState Key Laboratory of Vegetable Biobreeding, Tianjin Academy of Agricultural Sciences, Tianjin, 300192, China.
Qian WangState Key Laboratory of Vegetable Biobreeding, Tianjin Academy of Agricultural Sciences, Tianjin, 300192, China.
Jianjin WuTianjin Agricultural Development Service Center, Tianjin, 300061, China.
Mingyan HuaState Key Laboratory of Vegetable Biobreeding, Tianjin Academy of Agricultural Sciences, Tianjin, 300192, China.
Weihua ZhangCollege of Horticulture and Landscape, Tianjin Agricultural University, Tianjin, 300384, China.
Deling SunState Key Laboratory of Vegetable Biobreeding, Tianjin Academy of Agricultural Sciences, Tianjin, 300192, China. sundeling1961@163.com.
Xianhong GeNational Key Laboratory of Crop Genetic Improvement, National Center of Oil Crop Improvement (Wuhan), College of Plant Science and Technology, Huazhong Agricultural University, Wuhan, 430070, China. gexianhong@mail.hzau.edu.cn.
Xingwei YaoState Key Laboratory of Vegetable Biobreeding, Tianjin Academy of Agricultural Sciences, Tianjin, 300192, China. yaoxingwei99@126.com.
Rui ChenState Key Laboratory of Vegetable Biobreeding, Tianjin Academy of Agricultural Sciences, Tianjin, 300192, China. chenrui.taas@gmail.com.ORCID http://orcid.org/0000-0002-9725-5856

Funding

'131' innovative team construction project of Tianjin 201923Innovation Research and Experiment Program for Youth Scholar of Tianjin Academy of Agricultural Sciences 2022017Innovative Research Group Project of the National Natural Science Foundation of China 32302579Modern Agro-Industry Technology Research System of China CARS-23-A-04Natural Science Foundation of Tianjin Municipal Science and Technology Commission 23JCQNJC01040Natural Science Foundation of Tianjin-Science and Technology Correspondent Project 22JCYBJC00190
6 · The paper itself

Abstract

Cauliflower is a distinct subspecies of the Brassica oleracea plants due to its specialized and edible floral organ. Cauliflower curd is composed of enlarged inflorescence meristems that developed by a series of precise molecular regulations. Based solely on the curd solidity, cauliflower is generally classified into two groups (compact-curd and loose-curd), where curd branch length acts as a crucial parameter to determine the curd morphological difference. Herein, to understand the genetic basis of curd branch development, we utilized a total of 298 inbred lines representing two groups of cauliflower to comprehensively investigate the causal genes and regulatory mechanisms. Phylogenetic and population structure analyses revealed that two subgroups could be further categorized into the compact-curd and the loose-curd groups, respectively. Integrating the genotype and phenotype data, we conducted a genome-wide association study for the length of the outermost branch (LOB) and secondary branch (LSB) of the curd. Sixty-four significant loci were identified that are highly associated with curd branch development. Evidence from genome-wide selective sweep analysis (F

Indexed as

BrassicaPhenotypeChromosome MappingGenes, PlantGenetic Association StudiesGenome-Wide Association StudyGenotypePhylogenyPolymorphism, Single NucleotideQuantitative Trait Loci

Identifiers

PMID39196430

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.