Evidence map›Paper›PMID 39196422›Full record

ArticleMicrobial ecology2024

Implications of Domestication in Theobroma cacao L. Seed-Borne Microbial Endophytes Diversity.

Deisy Lisseth Toloza-Moreno, Roxana Yockteng, José Ives Pérez-Zuñiga, Cristian Salinas-Castillo, Alejandro Caro-Quintero

Abstract read
In one paragraph

Article in Microbial ecology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0cells of the map it votes in
0citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Deisy Lisseth Toloza-MorenoCentro de Investigación Tibaitatá, Corporación Colombiana de Investigación Agropecuaria (AGROSAVIA), Km 14 Vía Mosquera, Cundinamarca, Colombia.
Roxana YocktengCentro de Investigación Tibaitatá, Corporación Colombiana de Investigación Agropecuaria (AGROSAVIA), Km 14 Vía Mosquera, Cundinamarca, Colombia.
José Ives Pérez-ZuñigaCentro de Investigación Palmira, Corporación Colombiana de Investigación Agropecuaria (AGROSAVIA), Sede Popayán, Popayán, Cauca, Colombia.
Cristian Salinas-CastilloDepartamento de Biología, Facultad de Ciencias, Max Planck Tandem Group in Holobionts, Universidad Nacional de Colombia, Bogotá, Colombia.
Alejandro Caro-QuinteroDepartamento de Biología, Facultad de Ciencias, Max Planck Tandem Group in Holobionts, Universidad Nacional de Colombia, Bogotá, Colombia. acaroq@unal.edu.co.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The study of plant-microbe interactions is a rapidly growing research field, with increasing attention to the role of seed-borne microbial endophytes in protecting the plant during its development from abiotic and biotic stresses. Recent evidence suggests that seed microbiota is crucial in establishing the plant microbial community, affecting its composition and structure, and influencing plant physiology and ecology. For Theobroma cacao L., the diversity and composition of vertically transmitted microbes have yet to be addressed in detail. We explored the composition and diversity of seed-borne endophytes in cacao pods of commercial genotypes (ICS95, IMC67), recently liberated genotypes from AGROSAVIA (TCS01, TCS19), and landraces from Tumaco (Colombia) (AC9, ROS1, ROS2), to evaluate microbial vertical transmission and establishment in various tissues during plant development. We observed a higher abundance of Pseudomonas and Pantoea genera in the landraces and AGROSAVIA genotypes, while the commercial genotypes presented a higher number of bacteria species but in low abundance. In addition, all the genotypes and plant tissues showed a high percentage of fungi of the genus Penicillium. These results indicate that domestication in cacao has increased bacterial endophyte diversity but has reduced their abundance. We isolated some of these seed-borne endophytes to evaluate their potential as growth promoters and found that Bacillus, Pantoea, and Pseudomonas strains presented high production of indole acetic acid and ACC deaminase activity. Our results suggest that cacao domestication could lead to the loss of essential bacteria for seedling establishment and development. This study improves our understanding of the relationship and interaction between perennial plants and seed-borne microbiota.

Indexed as

BacteriaCacaoDomesticationEndophytesSeedsBiodiversityFungiGenotypeMicrobiotaACC deaminase activityIndole acetic acidSeed-borne microbial endophytesTheobroma cacao

Identifiers

PMID39196422
PMCPMC11358227

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.