Evidence map›Paper›PMID 39194151›Full record

ArticleBiochemistry2024

Rational Design of High Affinity Interaction Between CC Chemokine Binding Protein vCCI and CCL17/TARC.

Wenyan Guan, Lauren E Stark, Ning Zhang, Arjan Bains, Airam Martinez, Cynthia M Dupureur, Michael E Colvin, Patricia J LiWang

Abstract read
In one paragraph

Article in Biochemistry, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Wenyan GuanSchool of Natural Sciences, University of California Merced, 5200 North Lake Rd., Merced, California 95343, United States.
Lauren E StarkSchool of Natural Sciences, University of California Merced, 5200 North Lake Rd., Merced, California 95343, United States.
Ning ZhangSchool of Natural Sciences, University of California Merced, 5200 North Lake Rd., Merced, California 95343, United States.ORCID 0000-0002-3590-3774
Arjan BainsSchool of Natural Sciences, University of California Merced, 5200 North Lake Rd., Merced, California 95343, United States.
Airam MartinezSchool of Natural Sciences, University of California Merced, 5200 North Lake Rd., Merced, California 95343, United States.
Cynthia M DupureurDepartment of Chemistry and Biochemistry, University of Missouri-St. Louis, St. Louis, Missouri 63043, United States.
Michael E ColvinSchool of Natural Sciences, University of California Merced, 5200 North Lake Rd., Merced, California 95343, United States.
Patricia J LiWangSchool of Natural Sciences, University of California Merced, 5200 North Lake Rd., Merced, California 95343, United States.ORCID 0000-0002-9764-8246

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The poxvirus-derived protein vCCI (viral CC chemokine inhibitor) binds almost all members of the CC chemokine family with nanomolar affinity, inhibiting their pro-inflammatory actions. Understanding the affinity and specificity of vCCI could lead to new anti-inflammatory therapeutics. CCL17, also known as TARC, is unusual among CC chemokines by having only micromolar binding to vCCI. We have used sequence analysis and molecular simulations to determine the cause of this weak binding, which identified several locations in CCL17 where mutations seemed likely to improve binding to vCCI. Based on the aforementioned analysis, we expressed and tested multiple mutants of CCL17. We found two single point mutants V44K and Q45R that increased binding affinity to vCCI by 2-3-fold and, in combination, further improved affinity by 7-fold. The CCL17 triple mutant G17R/V44K/Q45R yielded a

Indexed as

Chemokine CCL17Protein BindingViral ProteinsAmino Acid SequenceChemokines, CCHumansMolecular Dynamics SimulationMutationCCL17 protein, humanChemokine CCL17Chemokines, CCViral Proteins

Identifiers

PMID39194151
PMCPMC11411725

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.