Evidence map›Paper›PMID 39194147›Full record

ArticleRNA biology2024

Alternative splicing events driven by altered levels of GEMIN5 undergo translation.

Rosario Francisco-Velilla, Salvador Abellan, Juan Antonio Garcia-Martin, Juan Carlos Oliveros, Encarnacion Martinez-Salas

Abstract read
In one paragraph

Article in RNA biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Rosario Francisco-VelillaGenome Dynamics and Function, Centro de Biologia Molecular Severo Ochoa, CSIC-UAM, Madrid, Spain.ORCID 0000-0002-4328-8732
Salvador AbellanGenome Dynamics and Function, Centro de Biologia Molecular Severo Ochoa, CSIC-UAM, Madrid, Spain.
Juan Antonio Garcia-MartinBioinformatics for Genomics and Proteomics Unit, Centro Nacional de Biotecnologia. CSIC, Madrid, Spain.ORCID 0000-0003-0993-4064
Juan Carlos OliverosBioinformatics for Genomics and Proteomics Unit, Centro Nacional de Biotecnologia. CSIC, Madrid, Spain.
Encarnacion Martinez-SalasGenome Dynamics and Function, Centro de Biologia Molecular Severo Ochoa, CSIC-UAM, Madrid, Spain.ORCID 0000-0002-8432-5587

Funding

Ministerio de Ciencia y Universidad [MICIU/AEI], PID2020-115096RB-I00
6 · The paper itself

Abstract

GEMIN5 is a multifunctional protein involved in various aspects of RNA biology, including biogenesis of snRNPs and translation control. Reduced levels of GEMIN5 confer a differential translation to selective groups of mRNAs, and biallelic variants reducing protein stability or inducing structural conformational changes are associated with neurological disorders. Here, we show that upregulation of GEMIN5 can be detrimental as it modifies the steady state of mRNAs and enhances alternative splicing (AS) events of genes involved in a broad range of cellular processes. RNA-Seq identification of the mRNAs associated with polysomes in cells with high levels of GEMIN5 revealed that a significant fraction of the differential AS events undergo translation. The association of mRNAs with polysomes was dependent on the type of AS event, being more frequent in the case of exon skipping. However, there were no major differences in the percentage of genes showing open-reading frame disruption. Importantly, differential AS events in mRNAs engaged in polysomes, eventually rendering non-functional proteins, encode factors controlling cell growth. The broad range of mRNAs comprising AS events engaged in polysomes upon GEMIN5 upregulation supports the notion that this multifunctional protein has evolved as a gene expression balancer, consistent with its dual role as a member of the SMN complex and as a modulator of protein synthesis, ultimately impinging on cell homoeostasis.

Indexed as

Alternative SplicingPolyribosomesProtein BiosynthesisRNA, MessengerSMN Complex ProteinsExonsGene Expression RegulationHeLa CellsHumansGEMIN5 protein, humanRNA, MessengerSMN Complex Proteinsalternative splicingGEMIN5polysome enrichmentRNA-sequencingSMN complextranslation control

Identifiers

PMID39194147
PMCPMC11364065

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.