Evidence map›Paper›PMID 39191828›Full record

ArticleScientific reports2024

Whole transcriptome sequencing revealed the gene regulatory network of hypoxic response in yak Sertoli cells.

Rui Ma, Yan Cui, Si-Jiu Yu, Yang-Yang Pan, Jun-Feng He, Ya-Ying Wang, Ling Zhao, Xue-Feng Bai, Shan-Shan Yang

Abstract read
In one paragraph

Article in Scientific reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Review
  2. Article
  3. A Multi-Tissue Yak (Animals : an open access journal from MDPI · 2026
    Article
  4. Article
  5. Review
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Rui MaCollege of Veterinary Medicine, Gansu Agricultural University, Lanzhou, 730070, China.
Yan CuiCollege of Veterinary Medicine, Gansu Agricultural University, Lanzhou, 730070, China. cuiyan369@sina.com.
Si-Jiu YuCollege of Veterinary Medicine, Gansu Agricultural University, Lanzhou, 730070, China. sijiuy@126.com.
Yang-Yang PanCollege of Veterinary Medicine, Gansu Agricultural University, Lanzhou, 730070, China.
Jun-Feng HeCollege of Veterinary Medicine, Gansu Agricultural University, Lanzhou, 730070, China.
Ya-Ying WangCollege of Veterinary Medicine, Gansu Agricultural University, Lanzhou, 730070, China.
Ling ZhaoCollege of Veterinary Medicine, Gansu Agricultural University, Lanzhou, 730070, China.
Xue-Feng BaiCollege of Veterinary Medicine, Gansu Agricultural University, Lanzhou, 730070, China.
Shan-Shan YangCollege of Veterinary Medicine, Gansu Agricultural University, Lanzhou, 730070, China.

Funding

National Natural Science Foundation of China 32273091National Natural Science Foundation of China 32372974
6 · The paper itself

Abstract

Yaks live in the Qinghai-Tibet Plateau for a long time where oxygen is scarce, but can ensure the smooth development of testis and spermatogenesis. The key lies in the functional regulation of the Sertoli cells under hypoxia. In this study, we sequenced yak Sertoli cells cultured in normal oxygen concentration (Normoxia) and treated with low oxygen concentration (Hypoxia) by whole transcriptomics, and screened out 194 differentially expressed mRNAs (DEmRNAs), 934 differentially expressed LncRNAs (DELncRNAs) and 129 differentially expressed miRNAs (DEmiRNAs). GO and KEGG analysis showed that these differential genes were mainly concentrated in PI3K-AKT, MAPK, RAS, and other signaling pathways, and were associated with glucose metabolism, tight junction, steroid hormone synthesis, cell fusion, and immunity of yak Sertoli cells. We constructed the gene interaction network of yak Sertoli cells in hypoxia and screened out the relationship pairs related to glucose metabolism and tight junction. The results suggested that the changes in energy metabolism, tight junction, and immune regulation of yak Sertoli cells under hypoxia might provide favorable conditions for spermatogenesis. This study provides data for further study on the role of non-coding RNA in testis development and spermatogenesis of yak.

Indexed as

Cell HypoxiaGene Regulatory NetworksSertoli CellsAnimalsCattleCells, CulturedGene Expression ProfilingGene Expression RegulationMaleMicroRNAsRNA, Long NoncodingRNA, MessengerSignal TransductionSpermatogenesisTranscriptomeMicroRNAsRNA, Long NoncodingRNA, MessengerHypoxiaLncRNAmiRNASertoli cellsYak

Identifiers

PMID39191828
PMCPMC11349989

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.