Evidence map›Paper›PMID 39190357›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2024

Diffusion barriers imposed by tissue topology shape Hedgehog morphogen gradients.

Gavin Schlissel, Miram Meziane, Domenic Narducci, Anders S Hansen, Pulin Li

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Position-dependent feedback drives scaling and robustness of morphogen gradients.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  6. Article
  7. Static morphogen scaling enables proportional growth in a tissue growth model inspired by axolotl limb regeneration.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  8. Dynamical systems of fate and form in development.Seminars in cell & developmental biology · 2025
    Review
  9. Article
  10. bioRxiv : the preprint server for biology · 2025
    Article
  11. Article
  12. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors.

Gavin SchlisselWhitehead Institute for Biomedical Research, Cambridge, MA 02142.
Miram MezianeWhitehead Institute for Biomedical Research, Cambridge, MA 02142.
Domenic NarducciDepartment of Biological Engineering, Massachusetts Institute of Technology, Cambridge, MA 02139.ORCID 0000-0002-3453-7514
Anders S HansenDepartment of Biological Engineering, Massachusetts Institute of Technology, Cambridge, MA 02139.ORCID 0000-0001-7540-7858
Pulin LiWhitehead Institute for Biomedical Research, Cambridge, MA 02142.ORCID 0000-0002-8525-4936

Funding

Center for 3D Structure and Physics of the GenomeUM1HG011536 · NHGRI · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI DEKKER, JOB, MIRNY, LEONID A · 2020 to 2024
$11.8M
Systematic Reconstruction of Epithelial-Mesenchymal Communication in Organ DevelopmentDP2HD108777 · NICHD · WHITEHEAD INSTITUTE FOR BIOMEDICAL RES · PI LI, PULIN · 2021 to 2024
$2.9M
DYNAMIC BOTTOM-UP DISSECTION OF CHROMATIN LOOPING AND GENE REGULATIONDP2GM140938 · NIGMS · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI HANSEN, ANDERS SEJR · 2020 to 2020
$2.3M
Super-resolution microscopy for dynamic analysis of focal enhancer amplifications in cancerR33CA257878 · NCI · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI HANSEN, ANDERS SEJR · 2021 to 2023
$1.1M
Spatio-Temporal Signaling Dynamics in Neuronal Cell Fate Decision and PatterningR00HD087532 · NICHD · WHITEHEAD INSTITUTE FOR BIOMEDICAL RES · PI LI, PULIN · 2019 to 2021
$736k
Genetic and biophysical analysis of morphogen gradient formationK99GM151487 · NIGMS · WHITEHEAD INSTITUTE FOR BIOMEDICAL RES · PI SCHLISSEL, GAVIN S · 2023 to 2024
$250k
HHS | NIH | Eunice Kennedy Shriver National Institute of Child Health and Human Development (NICHD) R00HD087532HHS | NIH | National Institute of General Medical Sciences (NIGMS) 1K99GM151487-01HHS | NIH | NIH Office of the Director (OD) DP2GM140938HHS | NIH | NIH Office of the Director (OD) DP2HD108777Jane Coffin Childs Memorial Fund for Medical Research (JCC) N/AMathWorks (The MathWorks, Inc.) N/ANCI NIH HHS R33 CA257878NICHD NIH HHS DP2 HD108777NIGMS NIH HHS DP2 GM140938NIH HHS R33CA257878NIH HHS UM1HG011536NSF 2036037Paul G. Allen Family Foundation (PGAFF) N/A
6 · The paper itself

Abstract

Animals use a small number of morphogens to pattern tissues, but it is unclear how evolution modulates morphogen signaling range to match tissues of varying sizes. Here, we used single-molecule imaging in reconstituted morphogen gradients and in tissue explants to determine that Hedgehog diffused extracellularly as a monomer, and rapidly transitioned between membrane-confined and -unconfined states. Unexpectedly, the vertebrate-specific protein SCUBE1 expanded Hedgehog gradients by accelerating the transition rates between states without affecting the relative abundance of molecules in each state. This observation could not be explained under existing models of morphogen diffusion. Instead, we developed a topology-limited diffusion model in which cell-cell gaps create diffusion barriers, which morphogens can only overcome by passing through a membrane-unconfined state. Under this model, SCUBE1 promoted Hedgehog secretion and diffusion by allowing it to transiently overcome diffusion barriers. This multiscale understanding of morphogen gradient formation unified prior models and identified knobs that nature can use to tune morphogen gradient sizes across tissues and organisms.

Indexed as

Hedgehog ProteinsSignal TransductionAnimalsCalcium-Binding ProteinsDiffusionHumansMiceMorphogenesisSingle Molecule ImagingCalcium-Binding ProteinsHedgehog Proteinsdiffusion barriermorphogensingle-molecule imagingSonic Hedgehogtissue topology

Identifiers

PMID39190357
PMCPMC11388384

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.