Evidence map›Paper›PMID 39189452›Full record

ReviewNucleic acids research2024

CRISPR-Cas target recognition for sensing viral and cancer biomarkers.

Shadi Rahimi, Sri Renukadevi Balusamy, Haribalan Perumalsamy, Anders Ståhlberg, Ivan Mijakovic

Abstract readReview
In one paragraph

Review in Nucleic acids research, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. Review
  2. Molecular mechanisms and biotechnology applications of CRISPR-Cas12a.Nature reviews. Molecular cell biology · 2026
    Review
  3. Article
  4. Review
  5. Review
  6. Article
  7. Review
  8. Article
  9. Review
  10. Article
  11. Review
  12. Review
  13. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Shadi RahimiDivision of Systems and Synthetic Biology, Department of Life Sciences, Chalmers University of Technology, SE-41296 Gothenburg, Sweden.ORCID 0000-0002-8376-9880
Sri Renukadevi BalusamyDepartment of Food Science and Biotechnology, Sejong University, Gwangjin-gu, Seoul, Republic of Korea.
Haribalan PerumalsamyCenter for Creative Convergence Education, Hanyang University, Seoul 04763, Republic of Korea.
Anders StåhlbergSahlgrenska Center for Cancer Research, Department of Laboratory Medicine, Institute of Biomedicine, Sahlgrenska Academy at University of Gothenburg, Gothenburg, Sweden.ORCID 0000-0003-4243-0191
Ivan MijakovicDivision of Systems and Synthetic Biology, Department of Life Sciences, Chalmers University of Technology, SE-41296 Gothenburg, Sweden.

Funding

ÅForsk 23-299ALF 965065Chalmers libraryFORMAS 2023-01315Kristina Stenborgs foundation for scientific research C 2021-1705Novo Nordisk Foundation NNF20OC0064547Sjöberg FoundationSweden's Innovation Agency 2020-04141Swedish Cancer Society 22-2080Swedish Childhood Cancer Foundation 2022-0030Swedish Research Council 2021-01008Swedish stateVinnova-Swelifes, Medtech4Healths 2020-04733
6 · The paper itself

Abstract

Nucleic acid-based diagnostics is a promising venue for detection of pathogens causing infectious diseases and mutations related to cancer. However, this type of diagnostics still faces certain challenges, and there is a need for more robust, simple and cost-effective methods. Clustered regularly interspaced short palindromic repeats (CRISPRs), the adaptive immune systems present in the prokaryotes, has recently been developed for specific detection of nucleic acids. In this review, structural and functional differences of CRISPR-Cas proteins Cas9, Cas12 and Cas13 are outlined. Thereafter, recent reports about applications of these Cas proteins for detection of viral genomes and cancer biomarkers are discussed. Further, we highlight the challenges associated with using these technologies to replace the current diagnostic approaches and outline the points that need to be considered for designing an ideal Cas-based detection system for nucleic acids.

Indexed as

Biomarkers, TumorCRISPR-Cas SystemsNeoplasmsCRISPR-Associated ProteinsGenome, ViralHumansBiomarkers, TumorCRISPR-Associated Proteins

Identifiers

PMID39189452
PMCPMC11417378

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.