ArticleBMC plant biology2024
SOS1 gene family in mangrove (Kandelia obovata): Genome-wide identification, characterization, and expression analyses under salt and copper stress.
Article in BMC plant biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.
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4 citing papers in PubMed.
- Genome-wide identification and expression analysis of the Glutathione S-transferase (GST) gene family in Avicennia marina under salt and auxin stress.BMC plant biology · 2026Article
- Genome-Wide Identification and Abiotic Stress-Responsive Expression Analysis of theLife (Basel, Switzerland) · 2025Article
- Genome-wide identification, characterization, and expression analysis of the SOS1 gene family in the medicinal plantFrontiers in plant science · 2025Article
- Seed priming using different agents can alleviate salt stress in kenaf (Physiology and molecular biology of plants : an international journal of functional plant biology · 2024Article
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7 authors.
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Abstract
backgroundSalt Overly Sensitive 1 (SOS1), a plasma membrane Na
resultsA genome-wide analysis and bioinformatics techniques were used in this study to identify 20 SOS1 genes in the genome of Kandelia obovata. Most of the SOS1 genes were found on the plasma membrane and dispersed over 11 of the 18 chromosomes. Based on phylogenetic analysis, KoSOS1s can be categorized into four groups, similar to Solanum tuberosum. Kandelia obovata's SOS1 gene family expanded due to tandem and segmental duplication. These SOS1 homologs shared similar protein structures, according to the results of the conserved motif analysis. The coding regions of 20 KoSOS1 genes consist of amino acids ranging from 466 to 1221, while the exons include amino acids ranging from 3 to 23. In addition, we found that the 2.0 kb upstream promoter region of the KoSOS1s gene contains several cis-elements associated with phytohormones and stress responses. According to the expression experiments, seven randomly chosen genes experienced up- and down-regulation of their expression levels in response to copper (CuCl
conclusionsFor the first time, this work systematically identified SOS1 genes in Kandelia obovata. Our investigations also encompassed physicochemical properties, evolution, and expression patterns, thereby furnishing a theoretical framework for subsequent research endeavours aimed at functionally characterizing the Kandelia obovata SOS1 genes throughout the life cycle of plants.
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