Evidence map›Paper›PMID 39187637›Full record

ArticleScientific reports2024

The effect of replication protein A inhibition and post-translational modification on ATR kinase signaling.

Matthew R Jordan, Greg G Oakley, Lindsey D Mayo, Lata Balakrishnan, John J Turchi

Abstract read
In one paragraph

Article in Scientific reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Identification ofBiomedicines · 2026
    Article
  3. Article
  4. Review
  5. Review
  6. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors.

Matthew R JordanDepartment of Medicine, Indiana University School of Medicine, Indianapolis, IN, 64202, USA.
Greg G OakleyDepartment of Oral Biology, University of Nebraska Medical Center, Lincoln, NE, 68583, USA.
Lindsey D MayoDepartment of Pediatrics, Indiana University School of Medicine, Indianapolis, IN, 46202, USA.
Lata BalakrishnanDepartment of Biology, School of Science, Indiana University Indianapolis, Indianapolis, IN, 46202, USA.
John J TurchiDepartment of Medicine, Indiana University School of Medicine, Indianapolis, IN, 64202, USA. jturchi@iu.edu.

Funding

Tumor Microenvironment and Metastasis ProgramP30CA082709 · NCI · INDIANA UNIV-PURDUE UNIV AT INDIANAPOLIS · PI Sara K Quinney · 1999 to 2026
$59.3M
Discovery and development of Ku-targeted small molecule inhibitors: A novel mechanism of DNA-PK inhibitionR01CA247370 · NCI · INDIANA UNIVERSITY INDIANAPOLIS · PI Navnath S Gavande, JOHN J. TURCHI · 2020 to 2026
$3.5M
Novel DNA damage response therapeutics targeting replication protein AR01CA257430 · NCI · INDIANA UNIVERSITY INDIANAPOLIS · PI TURCHI, JOHN J. · 2021 to 2025
$2.4M
American Cancer Society RSG-21-028-01PMCNational Science Foundation 1929346NCI NIH HHS P30 CA082709NCI NIH HHS R01 CA247370NCI NIH HHS R01 CA257430NIH HHS CA257430
6 · The paper itself

Abstract

The ATR kinase responds to elevated levels of single-stranded DNA (ssDNA) to activate the G2/M checkpoint, regulate origin utilization, preserve fork stability, and allow DNA repair to ensure genome integrity. The intrinsic replication stress in cancer cells makes this pathway an attractive therapeutic target. The ssDNA that drives ATR signaling is sensed by the ssDNA-binding protein replication protein A (RPA), which acts as a platform for ATRIP recruitment and subsequent ATR activation by TopBP1. We have developed chemical RPA inhibitors (RPAi) that block RPA-ssDNA interactions (RPA-DBi) and RPA protein-protein interactions (RPA-PPIi); both activities are required for ATR activation. Here, we biochemically reconstitute the ATR kinase signaling pathway and demonstrate that RPA-DBi and RPA-PPIi abrogate ATR-dependent phosphorylation of target proteins with selectivity advantages over active site ATR inhibitors. We demonstrate that RPA post-translational modifications (PTMs) impact ATR kinase activation but do not alter sensitivity to RPAi. Specifically, phosphorylation of RPA32 and TopBP1 stimulate, while RPA70 acetylation does not affect ATR phosphorylation of target proteins. Collectively, this work reveals the RPAi mechanism of action to inhibit ATR signaling that can be regulated by RPA PTMs and offers insight into the anti-cancer activity of ATR pathway-targeted cancer therapeutics.

Indexed as

Ataxia Telangiectasia Mutated ProteinsDNA, Single-StrandedProtein Processing, Post-TranslationalReplication Protein ASignal TransductionCarrier ProteinsDNA-Binding ProteinsHumansNuclear ProteinsPhosphorylationProtein BindingAtaxia Telangiectasia Mutated ProteinsATR protein, humanCarrier ProteinsDNA-Binding ProteinsDNA, Single-StrandedNuclear ProteinsReplication Protein ATOPBP1 protein, human

Identifiers

PMID39187637
PMCPMC11347632

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.