Evidence map›Paper›PMID 39186764›Full record

ArticleJournal of medical Internet research2024

Evaluation of a Natural Language Processing Approach to Identify Diagnostic Errors and Analysis of Safety Learning System Case Review Data: Retrospective Cohort Study.

Azade Tabaie, Alberta Tran, Tony Calabria, Sonita S Bennett, Arianna Milicia, William Weintraub, William James Gallagher, John Yosaitis, Laura C Schubel, Mary A Hill and 2 more

Abstract read
In one paragraph

Article in Journal of medical Internet research, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Azade TabaieCenter for Biostatistics, Informatics, and Data Science, MedStar Health Research Institute, Washington, DC, United States.ORCID 0000-0003-1869-5923
Alberta TranDepartment of Quality and Safety, MedStar Health Research Institute, Washington, DC, United States.ORCID 0000-0002-9091-7036
Tony CalabriaDepartment of Quality and Safety, MedStar Health Research Institute, Washington, DC, United States.ORCID 0009-0003-4491-8171
Sonita S BennettCenter for Biostatistics, Informatics, and Data Science, MedStar Health Research Institute, Washington, DC, United States.ORCID 0009-0008-3465-2986
Arianna MiliciaNational Center for Human Factors in Healthcare, MedStar Health Research Institute, Washington, DC, United States.ORCID 0000-0002-5139-1254
William WeintraubPopulation Health, MedStar Health Research Institute, Washington, DC, United States.ORCID 0000-0002-5384-5571
William James GallagherGeorgetown University School of Medicine, Washington, DC, United States.ORCID 0009-0006-3659-9811
John YosaitisGeorgetown University School of Medicine, Washington, DC, United States.ORCID 0009-0004-1879-7641
Laura C SchubelNational Center for Human Factors in Healthcare, MedStar Health Research Institute, Washington, DC, United States.ORCID 0000-0001-5258-1407
Mary A HillInstitute of Health Policy, Management & Evaluation, University of Toronto, Toronto, ON, Canada.ORCID 0000-0003-0352-2237
Kelly Michelle SmithInstitute of Health Policy, Management & Evaluation, University of Toronto, Toronto, ON, Canada.ORCID 0000-0002-9483-5118
Kristen MillerNational Center for Human Factors in Healthcare, MedStar Health Research Institute, Washington, DC, United States.ORCID 0000-0002-8991-2342

Funding

Re-engineering for Accurate, Timely, and Communicated Diagnosis of Cardiovascular Disease in Women (DREAM Lab)R18HS027280 · AHRQ · MEDSTAR HEALTH RESEARCH INSTITUTE · PI JOHN, YOSAITIS, MILLER, KRISTEN ELIZABETH · 2019 to 2022
$2.5M
AHRQ HHS R18 HS027280
6 · The paper itself

Abstract

backgroundDiagnostic errors are an underappreciated cause of preventable mortality in hospitals and pose a risk for severe patient harm and increase hospital length of stay.

objectiveThis study aims to explore the potential of machine learning and natural language processing techniques in improving diagnostic safety surveillance. We conducted a rigorous evaluation of the feasibility and potential to use electronic health records clinical notes and existing case review data.

methodsSafety Learning System case review data from 1 large health system composed of 10 hospitals in the mid-Atlantic region of the United States from February 2016 to September 2021 were analyzed. The case review outcome included opportunities for improvement including diagnostic opportunities for improvement. To supplement case review data, electronic health record clinical notes were extracted and analyzed. A simple logistic regression model along with 3 forms of logistic regression models (ie, Least Absolute Shrinkage and Selection Operator, Ridge, and Elastic Net) with regularization functions was trained on this data to compare classification performances in classifying patients who experienced diagnostic errors during hospitalization. Further, statistical tests were conducted to find significant differences between female and male patients who experienced diagnostic errors.

resultsIn total, 126 (7.4%) patients (of 1704) had been identified by case reviewers as having experienced at least 1 diagnostic error. Patients who had experienced diagnostic error were grouped by sex: 59 (7.1%) of the 830 women and 67 (7.7%) of the 874 men. Among the patients who experienced a diagnostic error, female patients were older (median 72, IQR 66-80 vs median 67, IQR 57-76; P=.02), had higher rates of being admitted through general or internal medicine (69.5% vs 47.8%; P=.01), lower rates of cardiovascular-related admitted diagnosis (11.9% vs 28.4%; P=.02), and lower rates of being admitted through neurology department (2.3% vs 13.4%; P=.04). The Ridge model achieved the highest area under the receiver operating characteristic curve (0.885), specificity (0.797), positive predictive value (PPV; 0.24), and F

conclusionsOur findings demonstrate that natural language processing can be a potential solution to more effectively identifying and selecting potential diagnostic error cases for review and therefore reducing the case review burden.

Indexed as

Diagnostic ErrorsNatural Language ProcessingAgedCohort StudiesElectronic Health RecordsFemaleHumansMachine LearningMaleMiddle AgedPatient SafetyRetrospective StudiesUnited Statesdiagnosticdiagnostic errorEHRelectronic health recordshospitallength of staymachine learningmortalitynatural language processingNLPpatient harmrisk

Identifiers

PMID39186764
PMCPMC11384169

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.