Evidence map›Paper›PMID 39184070›Full record

ArticleResearch square2024

EditABLE: A Simple Web Application for Designing Genome Editing Experiments.

Demetrios S Maxim, David Wei Wu, Najani Shanee Johnson, Vivek Charu, Jennefer N Carter, Shuchi Anand, George M Church, Vivek Bhalla

Abstract readPreprint
In one paragraph

Article in Research square, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors.

Demetrios S Maxim
David Wei Wu
Najani Shanee Johnson
Vivek Charu
Jennefer N Carter
Shuchi Anand
George M Church
Vivek Bhalla

Funding

CRISPR-Cas Editing as a Genetic Cure for Autosomal Dominant Polycystic Kidney DiseaseR41DK138689 · NIDDK · NEPHROGEN INC. · PI MAXIM, DEMETRIOS S, THAKOR, AVNESH SINH · 2023 to 2023
$325k
NIDDK NIH HHS R41 DK138689
6 · The paper itself

Abstract

CRISPR-Cas genome editing is transformative; however, there is no simple tool available for determining the optimal genome editing technology to create specific mutations for experimentation or to correct mutations as a curative therapy for specific diseases. We developed editABLE, an online resource (editable-app.stanford.edu) to provide computationally validated CRISPR editors and guide RNAs based on user provided sequence data. We demonstrate the utility of editABLE by applying it to one of the most common monogenic disorders, autosomal dominant polycystic kidney disease (ADPKD), identifying specific editing tools across the landscape of ADPKD mutations.

Identifiers

PMID39184070
PMCPMC11343172

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.