Evidence map›Paper›PMID 39183190›Full record

ArticleNature communications2024

Microeukaryote metabolism across the western North Atlantic Ocean revealed through autonomous underwater profiling.

Natalie R Cohen, Arianna I Krinos, Riss M Kell, Rebecca J Chmiel, Dawn M Moran, Matthew R McIlvin, Paloma Z Lopez, Alexander J Barth, Joshua P Stone, Brianna A Alanis and 6 more

Abstract read
In one paragraph

Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
  2. Salinity Effects on Aquatic and Host Intestinal Microbiota Dynamics inAnimals : an open access journal from MDPI · 2025
    Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors.

Natalie R CohenUniversity of Georgia Skidaway Institute of Oceanography, Savannah, GA, 31411, USA. cohen@uga.edu.ORCID 0000-0001-6156-9186
Arianna I KrinosWoods Hole Oceanographic Institution, Woods Hole, Falmouth, MA, 02543, USA.
Riss M KellWoods Hole Oceanographic Institution, Woods Hole, Falmouth, MA, 02543, USA.
Rebecca J ChmielWoods Hole Oceanographic Institution, Woods Hole, Falmouth, MA, 02543, USA.
Dawn M MoranWoods Hole Oceanographic Institution, Woods Hole, Falmouth, MA, 02543, USA.
Matthew R McIlvinWoods Hole Oceanographic Institution, Woods Hole, Falmouth, MA, 02543, USA.
Paloma Z LopezWoods Hole Oceanographic Institution, Woods Hole, Falmouth, MA, 02543, USA.ORCID 0009-0009-3046-8281
Alexander J BarthUniversity of South Carolina, Columbia, SC, 29208, USA.ORCID 0000-0001-7154-6260
Joshua P StoneUniversity of South Carolina, Columbia, SC, 29208, USA.
Brianna A AlanisUniversity of Texas Rio Grande Valley, Edinburg, TX, 78539, USA.
Eric W ChanUniversity of Texas Rio Grande Valley, Edinburg, TX, 78539, USA.
John A BreierUniversity of Texas Rio Grande Valley, Edinburg, TX, 78539, USA.
Michael V JakubaWoods Hole Oceanographic Institution, Woods Hole, Falmouth, MA, 02543, USA.ORCID 0000-0002-0440-0074
Rod JohnsonBermuda Institute of Ocean Sciences, St. George's, GE, 01, Bermuda.
Harriet AlexanderWoods Hole Oceanographic Institution, Woods Hole, Falmouth, MA, 02543, USA.ORCID 0000-0003-1308-8008
Mak A SaitoWoods Hole Oceanographic Institution, Woods Hole, Falmouth, MA, 02543, USA. msaito@whoi.edu.ORCID 0000-0001-6040-9295

Funding

Tumor Biology and Microenvironment ProgramP30CA013696 · NCI · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI Anil K Rustgi · 1985 to 2026
$115.3M
National Science Foundation (NSF) OCE-1333212National Science Foundation (NSF) OCE-1658030National Science Foundation (NSF) OCE-1658067National Science Foundation (NSF) OCE-1924508National Science Foundation (NSF) OCE-2123055National Science Foundation (NSF) OCE-2125063NCI NIH HHS P30 CA013696Simons Foundation 1038971Simons Foundation 544236Simons Foundation #931886United States Department of Commerce | National Oceanic and Atmospheric Administration (NOAA) NA16SEC4810009U.S. Department of Energy (DOE) DE-SC0020347
6 · The paper itself

Abstract

Microeukaryotes are key contributors to marine carbon cycling. Their physiology, ecology, and interactions with the chemical environment are poorly understood in offshore ecosystems, and especially in the deep ocean. Using the Autonomous Underwater Vehicle Clio, microbial communities along a 1050 km transect in the western North Atlantic Ocean were surveyed at 10-200 m vertical depth increments to capture metabolic signatures spanning oligotrophic, continental margin, and productive coastal ecosystems. Microeukaryotes were examined using a paired metatranscriptomic and metaproteomic approach. Here we show a diverse surface assemblage consisting of stramenopiles, dinoflagellates and ciliates represented in both the transcript and protein fractions, with foraminifera, radiolaria, picozoa, and discoba proteins enriched at >200 m, and fungal proteins emerging in waters >3000 m. In the broad microeukaryote community, nitrogen stress biomarkers were found at coastal sites, with phosphorus stress biomarkers offshore. This multi-omics dataset broadens our understanding of how microeukaryotic taxa and their functional processes are structured along environmental gradients of temperature, light, and nutrients.

Indexed as

DinoflagellidaEcosystemSeawaterAtlantic OceanCarbon CycleCiliophoraNitrogenProteomicsStramenopilesTranscriptomeNitrogen

Identifiers

PMID39183190
PMCPMC11345423

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.