Evidence map›Paper›PMID 39182111›Full record

ArticleBiotechnology for biofuels and bioproducts2024

The impact of the carbohydrate-binding module on how a lytic polysaccharide monooxygenase modifies cellulose fibers.

Fredrik G Støpamo, Irina Sulaeva, David Budischowsky, Jenni Rahikainen, Kaisa Marjamaa, Kristiina Kruus, Antje Potthast, Vincent G H Eijsink, Anikó Várnai

Abstract read
In one paragraph

Article in Biotechnology for biofuels and bioproducts, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

9 authors.

Fredrik G StøpamoNorwegian University of Life Sciences (NMBU), Ås, Norway.
Irina SulaevaUniversity of Natural Resources and Life Sciences (BOKU), Vienna, Austria.
David BudischowskyUniversity of Natural Resources and Life Sciences (BOKU), Vienna, Austria.
Jenni RahikainenVTT Technical Research Centre of Finland, Espoo, Finland.
Kaisa MarjamaaVTT Technical Research Centre of Finland, Espoo, Finland.
Kristiina KruusVTT Technical Research Centre of Finland, Espoo, Finland.
Antje PotthastUniversity of Natural Resources and Life Sciences (BOKU), Vienna, Austria.
Vincent G H EijsinkNorwegian University of Life Sciences (NMBU), Ås, Norway.
Anikó VárnaiNorwegian University of Life Sciences (NMBU), Ås, Norway. aniko.varnai@nmbu.no.

Funding

Academy of Finland 326359Bundesministerium für Land- und Forstwirtschaft, Umwelt und Wasserwirtschaft 101379Horizon 2020 773324Norges Forskningsråd 297907Novo Nordisk Fonden 0061165
6 · The paper itself

Abstract

backgroundIn recent years, lytic polysaccharide monooxygenases (LPMOs) that oxidatively cleave cellulose have gained increasing attention in cellulose fiber modification. LPMOs are relatively small copper-dependent redox enzymes that occur as single domain proteins but may also contain an appended carbohydrate-binding module (CBM). Previous studies have indicated that the CBM "immobilizes" the LPMO on the substrate and thus leads to more localized oxidation of the fiber surface. Still, our understanding of how LPMOs and their CBMs modify cellulose fibers remains limited.

resultsHere, we studied the impact of the CBM on the fiber-modifying properties of NcAA9C, a two-domain family AA9 LPMO from Neurospora crassa, using both biochemical methods as well as newly developed multistep fiber dissolution methods that allow mapping LPMO action across the fiber, from the fiber surface to the fiber core. The presence of the CBM in NcAA9C improved binding towards amorphous (PASC), natural (Cell I), and alkali-treated (Cell II) cellulose, and the CBM was essential for significant binding of the non-reduced LPMO to Cell I and Cell II. Substrate binding of the catalytic domain was promoted by reduction, allowing the truncated CBM-free NcAA9C to degrade Cell I and Cell II, albeit less efficiently and with more autocatalytic enzyme degradation compared to the full-length enzyme. The sequential dissolution analyses showed that cuts by the CBM-free enzyme are more evenly spread through the fiber compared to the CBM-containing full-length enzyme and showed that the truncated enzyme can penetrate deeper into the fiber, thus giving relatively more oxidation and cleavage in the fiber core.

conclusionsThese results demonstrate the capability of LPMOs to modify cellulose fibers from surface to core and reveal how variation in enzyme modularity can be used to generate varying cellulose-based materials. While the implications of these findings for LPMO-based cellulose fiber engineering remain to be explored, it is clear that the presence of a CBM is an important determinant of the three-dimensional distribution of oxidation sites in the fiber.

Indexed as

AA9 LPMOsCarbonyl detectionCBMCelluloseEnzymatic fiber engineeringFluorescenceFunctional variationOxidationSize exclusion chromatography

Identifiers

PMID39182111
PMCPMC11344300

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.