Evidence map›Paper›PMID 39180374›Full record

ReviewCancer science2024

Genomic structural variants analysis in leukemia by a novel cytogenetic technique: Optical genome mapping.

Song Lu, Kefu Liu, Di Wang, Yuan Ye, Zhiping Jiang, Yunhua Gao

Abstract readReview
In one paragraph

Review in Cancer science, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Review
  2. [Application of optical genome mapping technology in the genetic diagnosis of a family with a cryptic complex chromosomal balanced translocations].Zhong nan da xue xue bao. Yi xue ban = Journal of Central South University. Medical sciences · 2026
    Article
  3. Optical Genome Mapping as a New Approach to Detecting Cytogenetic Abnormalities: Why Is It Difficult in Multiple Myeloma?Turkish journal of haematology : official journal of Turkish Society of Haematology · 2025
    Article
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Song LuCenter for Advanced Measurement Science, National Institute of Metrology, Beijing, China.ORCID https://orcid.org/0009-0002-9378-5777
Kefu LiuMOE Key Laboratory of Rare Pediatric Diseases & Hunan Key Laboratory of Medical Genetics, School of Life Sciences, Central South University, Changsha, Hunan, China.
Di WangCenter for Advanced Measurement Science, National Institute of Metrology, Beijing, China.
Yuan YeCollege of Life Science and Technology, Huazhong University of Science and Technology, Wuhan, China.
Zhiping JiangDepartment of Hematology, Xiangya Hospital, Central South University, Changsha, Hunan, China.
Yunhua GaoCenter for Advanced Measurement Science, National Institute of Metrology, Beijing, China.

Funding

the National Key Research and Development Program of China 2023YFF0614603
6 · The paper itself

Abstract

Genomic structural variants (SVs) play a pivotal role in driving the evolution of hematologic malignancies, particularly in leukemia, in which genetic abnormalities are crucial features. Detecting SVs is essential for achieving precise diagnosis and prognosis in these cases. Karyotyping, often complemented by fluorescence in situ hybridization and/or chromosomal microarray analysis, provides standard diagnostic outcomes for various types of SVs in front-line testing for leukemia. Recently, optical genome mapping (OGM) has emerged as a promising technique due to its ability to detect all SVs identified by other cytogenetic methods within one single assay. Furthermore, OGM has revealed additional clinically significant SVs in various clinical laboratories, underscoring its considerable potential for enhancing front-line testing in cases of leukemia. This review aims to elucidate the principles of conventional cytogenetic techniques and OGM, with a focus on the technical performance of OGM and its applications in diagnosing and prognosticating myelodysplastic syndromes, acute myeloid leukemia, acute lymphoblastic leukemia, and chronic lymphocytic leukemia.

Indexed as

LeukemiaChromosome MappingCytogenetic AnalysisGenomic Structural VariationHumansIn Situ Hybridization, FluorescenceKaryotypingPrognosiscytogeneticsoptical genome mappingstructural variants analysistechnical performance

Identifiers

PMID39180374
PMCPMC11531954

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.