Evidence map›Paper›PMID 39179693›Full record

ArticleNature microbiology2024

Evolution of SARS-CoV-2 in the murine central nervous system drives viral diversification.

Jacob Class, Lacy M Simons, Ramon Lorenzo-Redondo, Jazmin Galván Achi, Laura Cooper, Tanushree Dangi, Pablo Penaloza-MacMaster, Egon A Ozer, Sarah E Lutz, Lijun Rong and 2 more

Abstract read
In one paragraph

Article in Nature microbiology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

12 authors.

Jacob Class *Department of Microbiology and Immunology, College of Medicine, University of Illinois Chicago, Chicago, IL, USA.ORCID http://orcid.org/0000-0003-1928-5950
Lacy M Simons *Department of Medicine, Division of Infectious Diseases, Feinberg School of Medicine, Northwestern University, Chicago, IL, USA.ORCID http://orcid.org/0000-0003-4041-6775
Ramon Lorenzo-RedondoDepartment of Medicine, Division of Infectious Diseases, Feinberg School of Medicine, Northwestern University, Chicago, IL, USA.ORCID http://orcid.org/0000-0002-5462-9483
Jazmin Galván AchiDepartment of Microbiology and Immunology, College of Medicine, University of Illinois Chicago, Chicago, IL, USA.ORCID http://orcid.org/0000-0002-6177-0397
Laura CooperDepartment of Microbiology and Immunology, College of Medicine, University of Illinois Chicago, Chicago, IL, USA.
Tanushree DangiDepartment of Microbiology-Immunology, Feinberg School of Medicine, Northwestern University, Chicago, IL, USA.ORCID http://orcid.org/0000-0003-1698-8087
Pablo Penaloza-MacMasterDepartment of Microbiology-Immunology, Feinberg School of Medicine, Northwestern University, Chicago, IL, USA.ORCID http://orcid.org/0000-0001-9986-4906
Egon A OzerDepartment of Medicine, Division of Infectious Diseases, Feinberg School of Medicine, Northwestern University, Chicago, IL, USA.ORCID http://orcid.org/0000-0002-7131-3691
Sarah E LutzDepartment of Anatomy and Cell Biology, College of Medicine, University of Illinois Chicago, Chicago, IL, USA.ORCID http://orcid.org/0000-0002-6388-753X
Lijun RongDepartment of Microbiology and Immunology, College of Medicine, University of Illinois Chicago, Chicago, IL, USA.
Judd F HultquistDepartment of Medicine, Division of Infectious Diseases, Feinberg School of Medicine, Northwestern University, Chicago, IL, USA. judd.hultquist@northwestern.edu.ORCID http://orcid.org/0000-0001-6424-4280
Justin M RichnerDepartment of Microbiology and Immunology, College of Medicine, University of Illinois Chicago, Chicago, IL, USA. richner@uic.edu.ORCID http://orcid.org/0000-0002-5344-118X

Funding

Technology CoreU19AI135964 · NIAID · NORTHWESTERN UNIVERSITY AT CHICAGO · PI RICHARD G WUNDERINK · 2018 to 2026
$24.7M
Mechanisms and Treatment of SARS-CoV-2 induced Lung Endothelial InjuryR01HL162308 · NHLBI · UNIVERSITY OF ILLINOIS AT CHICAGO · PI REHMAN, JALEES, RICHNER, JUSTIN · 2022 to 2025
$2.9M
Dengue virus mRNA lipid nanoparticle vaccineR01AI150672 · NIAID · UNIVERSITY OF ILLINOIS AT CHICAGO · PI RICHNER, JUSTIN · 2021 to 2024
$2.3M
Mechanisms of Immune Dysfunction in Oral Post-Acute Sequelae of Covid-19R56DE033249 · NIDCR · UNIVERSITY OF ILLINOIS AT CHICAGO · PI NAQVI, AFSAR RAZA, RICHNER, JUSTIN · 2023 to 2023
$581k
Assessing the Risk of SARS-CoV-2 Remdesivir ResistanceR21AI163912 · NIAID · NORTHWESTERN UNIVERSITY AT CHICAGO · PI HULTQUIST, JUDD F · 2021 to 2022
$440k
ANTIGEN RECOGNITITON BY CYTOTOXIC T LYMPHOCYTESR01AI015067 · NIAID · UNIVERSITY OF MINNESOTA TWIN CITIES · PI FAN, DAVID P · 1985 to 1986
–
NHLBI NIH HHS R01 HL162308NIAID NIH HHS R01 AI150672NIAID NIH HHS R21 AI163912NIAID NIH HHS U19 AI135964NIDCR NIH HHS R56 DE033249United States Department of Defense | United States Army | Army Medical Command | Congressionally Directed Medical Research Programs (CDMRP) MS200290U.S. Department of Health & Human Services | NIH | National Institute of Allergy and Infectious Diseases (NIAID) R01AI15067U.S. Department of Health & Human Services | NIH | National Institute of Allergy and Infectious Diseases (NIAID) R21AI163912U.S. Department of Health & Human Services | NIH | National Institute of Allergy and Infectious Diseases (NIAID) U19AI135964
6 · The paper itself

Abstract

Severe coronavirus disease 2019 and post-acute sequelae of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) infection are associated with neurological complications that may be linked to direct infection of the central nervous system (CNS), but the selective pressures ruling neuroinvasion are poorly defined. Here we assessed SARS-CoV-2 evolution in the lung versus CNS of infected mice. Higher levels of viral divergence were observed in the CNS than the lung after intranasal challenge with a high frequency of mutations in the spike furin cleavage site (FCS). Deletion of the FCS significantly attenuated virulence after intranasal challenge, with lower viral titres and decreased morbidity compared with the wild-type virus. Intracranial inoculation of the FCS-deleted virus, however, was sufficient to restore virulence. After intracranial inoculation, both viruses established infection in the lung, but dissemination from the CNS to the lung required the intact FCS. Cumulatively, these data suggest a critical role for the FCS in determining SARS-CoV-2 tropism and compartmentalization.

Indexed as

Central Nervous SystemCOVID-19LungSARS-CoV-2Spike Glycoprotein, CoronavirusViral TropismAnimalsDisease Models, AnimalEvolution, MolecularFemaleFurinHumansMiceMutationVirulenceFurinSpike Glycoprotein, Coronavirusspike protein, SARS-CoV-2

Identifiers

PMID39179693
PMCPMC12863430

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.