Evidence map›Paper›PMID 39177419›Full record

ArticleACS sensors2024

Heparin-Bead Extraction Enhanced Fluorogenic Aptamer-Thrombin Composite Reporter Enables Sensitive and Rapid Detection of Functional Antithrombin.

He Yan, Zimu Tian, Emma Ziegenbein, Ying Liu, Amanda Santana, Adam S Veige, Bruce Spiess, Weihong Tan, Yong Zeng

Abstract read
In one paragraph

Article in ACS sensors, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

He YanDepartment of Chemistry, University of Florida, Gainesville, Florida 32611, United States.ORCID 0000-0001-8389-5281
Zimu TianDepartment of Chemistry, University of Florida, Gainesville, Florida 32611, United States.
Emma ZiegenbeinDepartment of Biomedical Engineering, Gainesville, Florida 32611, United States.
Ying LiuDepartment of Chemistry, University of Florida, Gainesville, Florida 32611, United States.
Amanda SantanaDepartment of Chemistry, University of Florida, Gainesville, Florida 32611, United States.
Adam S VeigeDepartment of Chemistry, University of Florida, Gainesville, Florida 32611, United States.ORCID 0000-0002-7020-9251
Bruce SpiessDepartment of Anesthesiology, College of Medicine, Gainesville, Florida 32611, United States.
Weihong TanDepartment of Chemistry, University of Florida, Gainesville, Florida 32611, United States.ORCID 0000-0002-8066-1524
Yong ZengDepartment of Chemistry, University of Florida, Gainesville, Florida 32611, United States.ORCID 0000-0003-0537-109X

Funding

Extracellular Vesicle Proteomic Fingerprinting of Ovarian Cancer for Early Detection with a Nanoengineered MicrosystemR01CA260132 · NCI · UNIVERSITY OF KANSAS MEDICAL CENTER · PI GODWIN, ANDREW K., ZENG, YONG · 2021 to 2025
$3.4M
Nano-Engineered Lab-on-a-Chip for Assessing HuR-Regulated Exosomes for Cancer Monitoring and Targeted TherapyR01CA243445 · NCI · UNIVERSITY OF KANSAS LAWRENCE · PI DIXON, DAN ALAN, XU, LIANG · 2019 to 2023
$3.0M
Integrated exosomes profiling for minimally invasive diagnosis and monitoring of cancerR33CA214333 · NCI · UNIVERSITY OF KANSAS LAWRENCE · PI GODWIN, ANDREW K., ZENG, YONG · 2017 to 2019
$1.2M
Integrative Functional Profiling of Tumor-Derived Extracellular VesiclesR33CA252158 · NCI · UNIVERSITY OF FLORIDA · PI XU, LIANG, ZENG, YONG · 2021 to 2024
$1.0M
NCI NIH HHS R01 CA243445NCI NIH HHS R01 CA260132NCI NIH HHS R33 CA214333NCI NIH HHS R33 CA252158
6 · The paper itself

Abstract

Antithrombin (AT) deficiency in the extracorporeal circulation during cardiac surgery leads to uncontrolled inflammation and vascular damage in patients. AT levels decrease in sepsis, major trauma, extracorporeal membrane oxygenation, and eclampsia. Monitoring plasma AT levels facilitates the accurate restoration of AT to baseline values through precise supplementation. Traditional methods of chromogenic assay and enzyme-linked immunosorbent assay (ELISA) kits encounter challenges, such as interference, inconsistency, and delayed response times, making real-time, reliable antithrombin monitoring a clinical gap. To address this critical need, we develop a heparin-bead extraction enhanced fluoroGenic aptamer-thrombin composite reporter (HExGATOR) for the rapid, sensitive, and precise detection of functional AT in plasma. Our design employs thrombin-binding aptamers and a fluorescence "turn on" technology such that a signal is produced upon the interaction of AT with the otherwise "turned off" aptamer-thrombin complex. The prominent signal-background interference originating from plasma is remarkably diminished by using a heparin-bead solid-phase extraction of AT. We achieved highly sensitive and rapid detection of AT in 5 to 20 min with a limit of detection of 15.11 nM. This approach offers a promising alternative to traditional AT tests in clinical settings, potentially facilitating personalized anticoagulant therapy.

Indexed as

AntithrombinsAptamers, NucleotideFluorescent DyesHeparinThrombinBiosensing TechniquesHumansLimit of DetectionSolid Phase ExtractionAntithrombinsAptamers, NucleotideFluorescent DyesHeparinThrombinthrombin aptamerantithrombinantithrombin deficiencyaptamerextractionheparinthrombin

Identifiers

PMID39177419
PMCPMC13628321

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.