Evidence map›Paper›PMID 39176990›Full record

ArticleGenome biology and evolution2024

Evolution of Opsin Genes in Caddisflies (Insecta: Trichoptera).

Ashlyn Powell, Jacqueline Heckenhauer, Steffen U Pauls, Blanca Ríos-Touma, Ryoichi B Kuranishi, Ralph W Holzenthal, Ernesto Razuri-Gonzales, Seth Bybee, Paul B Frandsen

Abstract read
In one paragraph

Article in Genome biology and evolution, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Ashlyn PowellDepartment of Plant and Wildlife Sciences, Brigham Young University, Provo, UT, USA.ORCID 0000-0001-6706-9190
Jacqueline HeckenhauerLOEWE Centre for Translational Biodiversity Genomics, Frankfurt, Germany.ORCID 0000-0001-8771-9154
Steffen U PaulsLOEWE Centre for Translational Biodiversity Genomics, Frankfurt, Germany.ORCID 0000-0002-6451-3425
Blanca Ríos-ToumaFacultad de Ingenierías y Ciencias Aplicadas, Ingeniería Ambiental, Grupo de Investigación en Biodiversidad, Medio Ambiente y Salud, Universidad de Las Américas, Quito, Ecuador.ORCID 0000-0002-3921-0908
Ryoichi B KuranishiGraduate School of Science, Chiba University, Chiba, Japan.ORCID 0000-0002-6353-0450
Ralph W HolzenthalDepartment of Entomology, University of Minnesota, St Paul, MN, USA.ORCID 0000-0003-1853-6340
Ernesto Razuri-GonzalesSenckenberg Research Institute and Natural History Museum Frankfurt, Frankfurt, Germany.ORCID 0000-0002-7554-0816
Seth BybeeDepartment of Biology, Brigham Young University, Provo, UT, USA.ORCID 0000-0001-6224-6303
Paul B FrandsenDepartment of Plant and Wildlife Sciences, Brigham Young University, Provo, UT, USA.ORCID 0000-0002-4801-7579

Funding

BYU College of Life SciencesDeutsche Forschungsgemeinschaft 502865717Dirección General de InvestigaciónNational Science Foundation 2217155Universidad de Las Américas
6 · The paper itself

Abstract

Insects have evolved complex and diverse visual systems in which light-sensing protein molecules called "opsins" couple with a chromophore to form photopigments. Insect photopigments group into three major gene families based on wavelength sensitivity: long wavelength (LW), short wavelength (SW), and ultraviolet wavelength (UV). In this study, we identified 123 opsin sequences from whole-genome assemblies across 25 caddisfly species (Insecta: Trichoptera). We discovered the LW opsins have the most diversity across species and form two separate clades in the opsin gene tree. Conversely, we observed a loss of the SW opsin in half of the trichopteran species in this study, which might be associated with the fact that caddisflies are active during low-light conditions. Lastly, we found a single copy of the UV opsin in all the species in this study, with one exception: Athripsodes cinereus has two copies of the UV opsin and resides within a clade of caddisflies with colorful wing patterns.

Indexed as

Evolution, MolecularInsectaOpsinsPhylogenyAnimalsInsect ProteinsInsect ProteinsOpsinscaddisfliesevolutioninsectsopsinsTrichopteravisual systems

Identifiers

PMID39176990
PMCPMC11381090

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.