Evidence map›Paper›PMID 39175163›Full record

ArticleAnnals of botany2024

Allopolyploidy enhances survival advantages for urban environments in the native plant genus Commelina.

Hina Shimomai, Nakata Taichi, Koki R Katsuhara, Seiji Kato, Atushi Ushimaru, Nobuko Ohmido

Abstract read
In one paragraph

Article in Annals of botany, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Hina ShimomaiGraduate School of Human Development and Environment, Kobe University, 657-8501, Kobe, Japan.
Nakata TaichiGraduate School of Human Development and Environment, Kobe University, 657-8501, Kobe, Japan.
Koki R KatsuharaGraduate School of Environmental and Life Science, Okayama University, Okayama, Okayama 700-8530, Japan.
Seiji KatoGraduate School of Human Development and Environment, Kobe University, 657-8501, Kobe, Japan.
Atushi UshimaruGraduate School of Human Development and Environment, Kobe University, 657-8501, Kobe, Japan.
Nobuko OhmidoGraduate School of Human Development and Environment, Kobe University, 657-8501, Kobe, Japan.

Funding

Japan Society for the Promotion of Science JPJSBP120223504JST fellowship JPMJF2126
6 · The paper itself

Abstract

BACKGROUND AND

aimsUrbanization-induced environmental changes affect the geographical distribution of natural plant species. This study focused on how polyploidization, a dynamic genome change, influences the survival and distribution of Commelina communis (Cc) and its subspecies C. communis f. ciliata (Ccfc), which have variable chromosome numbers (e.g. Cc, 2n = 88 for Cc; Ccfc, 2n = 46 for Ccfc). The aim was to investigate polyploidization effects on natural plant distribution in urban environments.

methodsThe geographical distribution across urban-rural gradients was investigated at a total of 218 sites in Japan. Stomata size and density were measured and compared between Cc and Ccfc. Flow cytometry determined genome size and polyploidy. Chromosome karyotyping was performed using the genomic in situ hybridization (GISH) method. KEY

resultsUrban areas were exclusively dominated by Cc, while Cc and Ccfc coexisted in rural areas. Cc had larger and fewer stomata and a genome size more than twice that of Ccfc. GISH results indicated that Cc possesses Ccfc and another unknown genome, suggesting allopolyploidy.

conclusionsOur results show that the ploidy difference affects the geographical distribution, stomata traits and genome size between two distinct taxa in the genus Commelina, C. communis as a neo-tetraploid and C. communis f. ciliata, the diploid. Cc is an allopolyploid and is therefore not only polyploidy but also has an additional genome that provides new sets of genes and alleles, contributing to Cc having enhanced survival potentials in urban environments compared with Ccfc. This is the first investigation to clarify the distribution difference related to urban environments, the difference in stomata traits and genome size, and to study chromosome composition in Commelina species.

Indexed as

Genome, PlantPolyploidyChromosomes, PlantGenome SizeJapanPlant StomataUrbanizationAllopolyploidychromosome compositionCommelina communisgenome sizegenus Commelinageographical distributionGISHstomata traitssurvival potentialsurban environmentsurban–rural gradients

Identifiers

PMID39175163
PMCPMC11687629

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.