Evidence map›Paper›PMID 39172951›Full record

ArticleACS chemical neuroscience2024

Pore Formation by Amyloid-like Peptides: Effects of the Nonpolar-Polar Sequence Pattern.

Warin Rangubpit, Siwaporn Sungted, Jirasak Wong-Ekkabut, Hannah E Distaffen, Bradley L Nilsson, Cristiano L Dias

Abstract read
In one paragraph

Article in ACS chemical neuroscience, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Warin RangubpitDepartment of Physics, New Jersey Institute of Technology, Newark, New Jersey 07102-1982, United States.
Siwaporn SungtedDepartment of Physics, Faculty of Science, Kasetsart University, Bangkok 10900, Thailand.
Jirasak Wong-EkkabutDepartment of Physics, Faculty of Science, Kasetsart University, Bangkok 10900, Thailand.
Hannah E DistaffenDepartment of Chemistry, University of Rochester, Rochester, New York 14627-0216, United States.
Bradley L NilssonDepartment of Chemistry, University of Rochester, Rochester, New York 14627-0216, United States.ORCID 0000-0003-1193-3693
Cristiano L DiasDepartment of Physics, New Jersey Institute of Technology, Newark, New Jersey 07102-1982, United States.ORCID 0000-0002-8765-3922

Funding

Pathways and interactions accounting for the oligomerization of amyloid peptidesR15GM148982 · NIGMS · NEW JERSEY INSTITUTE OF TECHNOLOGY · PI DIAS, CRISTIANO LUIS · 2022 to 2025
$1.1M
NIGMS NIH HHS R15 GM148982
6 · The paper itself

Abstract

One of the mechanisms accounting for the toxicity of amyloid peptides in diseases like Alzheimer's and Parkinson's is the formation of pores on the plasma membrane of neurons. Here, we perform unbiased all-atom simulations of the full membrane damaging pathway, which includes adsorption, aggregation, and perforation of the lipid bilayer accounting for pore-like structures. Simulations are performed using four peptides made with the same amino acids. Differences in the nonpolar-polar sequence pattern of these peptides prompt them to adsorb into the membrane with the extended conformations oriented either parallel [peptide labeled F1, Ac-(FKFE)

Indexed as

Lipid BilayersAmino Acid SequenceAmyloid beta-PeptidesAmyloidogenic ProteinsCell MembraneHumansMolecular Dynamics SimulationAmyloid beta-PeptidesAmyloidogenic ProteinsLipid Bilayersamyloidlipid membranemembrane damagepermeationpore formationsequence pattern

Identifiers

PMID39172951
PMCPMC11443323

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.