Evidence map›Paper›PMID 39169233›Full record

ArticleNature immunology2024

Tumor editing suppresses innate and adaptive antitumor immunity and is reversed by inhibiting DNA methylation.

Ying Zhang, Pourya Naderi Yeganeh, Haiwei Zhang, Simon Yuan Wang, Zhouyihan Li, Bowen Gu, Dian-Jang Lee, Zhibin Zhang, Athanasios Ploumakis, Ming Shi and 4 more

Abstract read
PubMed Publisher
In one paragraph

Article in Nature immunology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed.

  1. Trial
  2. Review
  3. Review
  4. Review
  5. Article
  6. Article
  7. Leveraging Macrophage Metabolic Reprogramming for Enhanced Anti-Tumor Immunity.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Review
  8. Review
  9. Article
  10. Article
  11. Pyroptosis: Turning Up the Heat on Cancer.Annual review of immunology · 2026
    Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Review
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Ying Zhang *Program in Cellular and Molecular Medicine, Boston Children's Hospital, Boston, MA, USA. ying.zhang@pku.edu.cn.ORCID http://orcid.org/0000-0002-1116-2182
Pourya Naderi Yeganeh *Department of Pathology, Beth Israel Deaconess Medical Center, Boston, MA, USA.
Haiwei ZhangProgram in Cellular and Molecular Medicine, Boston Children's Hospital, Boston, MA, USA.
Simon Yuan WangDepartment of Pediatrics, Harvard Medical School, Boston, MA, USA.ORCID http://orcid.org/0000-0002-9089-2617
Zhouyihan LiProgram in Cellular and Molecular Medicine, Boston Children's Hospital, Boston, MA, USA.
Bowen GuProgram in Cellular and Molecular Medicine, Boston Children's Hospital, Boston, MA, USA.ORCID http://orcid.org/0000-0003-2629-9963
Dian-Jang LeeProgram in Cellular and Molecular Medicine, Boston Children's Hospital, Boston, MA, USA.ORCID http://orcid.org/0000-0001-7268-3240
Zhibin ZhangProgram in Cellular and Molecular Medicine, Boston Children's Hospital, Boston, MA, USA.ORCID http://orcid.org/0000-0003-1349-2713
Athanasios PloumakisHarvard Medical School, Boston, MA, USA.
Ming ShiDepartment of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, MA, USA.ORCID http://orcid.org/0000-0003-0527-0061
Hao WuProgram in Cellular and Molecular Medicine, Boston Children's Hospital, Boston, MA, USA.ORCID http://orcid.org/0000-0002-7281-8579
Eric Lieberman GreerDepartment of Pediatrics, Harvard Medical School, Boston, MA, USA.ORCID http://orcid.org/0000-0002-7501-7371
Winston HideDepartment of Pathology, Beth Israel Deaconess Medical Center, Boston, MA, USA. whide@bidmc.harvard.edu.ORCID http://orcid.org/0000-0002-8621-3271
Judy LiebermanProgram in Cellular and Molecular Medicine, Boston Children's Hospital, Boston, MA, USA. judy.lieberman@childrens.harvard.edu.ORCID http://orcid.org/0000-0002-6200-4715

Funding

Characterization of DNA N6-methyl adenine and its role in epigenetic memoryDP2AG055947 · NIA · BOSTON CHILDREN'S HOSPITAL · PI GREER, ERIC LIEBERMAN · 2016 to 2021
$3.2M
Gasdermin E and pyroptosis in cancerR01CA240955 · NCI · BOSTON CHILDREN'S HOSPITAL · PI LIEBERMAN, JUDY · 2020 to 2024
$2.5M
Gasdermin E-mediated pyroptosis in promoting antitumor immunity and cancer treatmentK99CA255841 · NCI · BOSTON CHILDREN'S HOSPITAL · PI ZHANG, YING · 2021 to 2022
$224k
NCI NIH HHS K99 CA255841NCI NIH HHS R01 CA240955NIA NIH HHS DP2 AG055947
6 · The paper itself

Abstract

Cancer cells edit gene expression to evade immunosurveillance. However, genome-wide studies of gene editing during early tumorigenesis are lacking. Here we used single-cell RNA sequencing in a breast cancer genetically engineered mouse model (GEMM) to identify edited genes without bias. Late tumors repressed antitumor immunity genes, reducing infiltrating immune cells and tumor-immune cell communications. Innate immune genes, especially interferon-stimulated genes, dominated the list of downregulated tumor genes, while genes that regulate cell-intrinsic malignancy were mostly unedited. Naive and activated CD8

Indexed as

Adaptive ImmunityDNA MethylationGene EditingImmunity, InnateAnimalsBreast NeoplasmsCD8-Positive T-LymphocytesCell Line, TumorDecitabineFemaleGene Expression Regulation, NeoplasticHumansLymphocytes, Tumor-InfiltratingMiceMice, Inbred C57BLMice, TransgenicDecitabine

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.